diff --git a/README.md b/README.md index 74161a8c..d62456e7 100644 --- a/README.md +++ b/README.md @@ -127,6 +127,7 @@ You will also need * [pybedtools](https://daler.github.io/pybedtools/) * [pyfaidx](https://pypi.org/project/pyfaidx/) * [pandas](https://pandas.pydata.org/) +* [pyyaml](https://pypi.org/project/PyYAML/) * [minimap2](https://github.com/lh3/minimap2) * [samtools](http://www.htslib.org/download/) * [STAR](https://github.com/alexdobin/STAR) (optional) diff --git a/requirements.txt b/requirements.txt index 694bb0e5..ed7ed899 100644 --- a/requirements.txt +++ b/requirements.txt @@ -5,3 +5,4 @@ pybedtools>=0.8.1 pysam>=0.15 packaging pyfaidx>=0.7 +pyyaml>=5.4 diff --git a/requirements_tests.txt b/requirements_tests.txt index 4d5d604f..47a0a1ce 100644 --- a/requirements_tests.txt +++ b/requirements_tests.txt @@ -11,3 +11,4 @@ pysam>=0.15 simplejson==3.17.0 six==1.14.0 pyfaidx>=0.7 +pyyaml>=5.4