diff --git a/docs/copying.html b/docs/copying.html index 003a9d9..231b191 100644 --- a/docs/copying.html +++ b/docs/copying.html @@ -3,7 +3,7 @@ - + diff --git a/docs/description.json b/docs/description.json index 039197e..e917d1d 100644 --- a/docs/description.json +++ b/docs/description.json @@ -1,14 +1,14 @@ { "generator": "generate_html", "generator_version": "0.3.3", - "date_generated": "2024-05-16", + "date_generated": "2024-05-17", "package": { "name": "statistics-resampling", - "version": "5.5.12", + "version": "5.5.13", "description": "The statistics-resampling package is an Octave package and Matlab toolbox that can be used to perform a wide variety of statistics tasks using non-parametric resampling methods. In particular, the functions included can be used to estimate bias, uncertainty (standard errors and confidence intervals), prediction error, and calculate p-values for null hypothesis significance tests. Variations of the resampling methods are included that improve the accuracy of the statistics for small samples and samples with complex dependence structures.", "shortdescription": "The statistics-resampling package is an Octave package and Matlab toolbox that can be used to perform a wide variety of statistics tasks using non-parametric resampling methods", - "date": "2024-05-15", + "date": "2024-05-17", "title": "A statistics package with a variety of resampling tools", "author": "Andrew Penn ", "maintainer": "Andrew Penn ", diff --git a/docs/function/boot.html b/docs/function/boot.html index 6ff4e3f..b069193 100644 --- a/docs/function/boot.html +++ b/docs/function/boot.html @@ -3,7 +3,7 @@ - + @@ -87,7 +87,7 @@

boot

vs. Smoothing; Proceedings of the Section on Statistics & the Environment. Alexandria, VA: American Statistical Association. - boot (version 2024.04.16) + boot (version 2024.04.24) Author: Andrew Charles Penn https://www.researchgate.net/profile/Andrew_Penn/ diff --git a/docs/function/boot1way.html b/docs/function/boot1way.html index fe755b0..1306cf1 100644 --- a/docs/function/boot1way.html +++ b/docs/function/boot1way.html @@ -3,7 +3,7 @@ - + @@ -143,7 +143,7 @@

boot1way

[1] Efron, and Tibshirani (1993) An Introduction to the Bootstrap. New York, NY: Chapman & Hall - boot1way (version 2023.10.04) + boot1way (version 2024.04.24) Bootstrap tests for comparing independent groups in a one-way layout Author: Andrew Charles Penn https://www.researchgate.net/profile/Andrew_Penn/ @@ -529,7 +529,7 @@

Demonstration 7

----------------------------------------------------------------------------- | Comparison | Test # | Ref # | Difference | t | p | |------------|------------|------------|------------|------------|----------| -| 1 | 2 | 1 | +0.3821 | +0.95 | .347 | +| 1 | 2 | 1 | +0.1067 | +0.19 | .838 | ----------------------------------------------------------------------------- | GROUP # | GROUP label | N | @@ -574,7 +574,7 @@

Demonstration 8

----------------------------------------------------------------------------- | Comparison | Test # | Ref # | Difference | t | p | |------------|------------|------------|------------|------------|----------| -| 1 | 2 | 1 | +0.6944 | +0.95 | .221 | +| 1 | 2 | 1 | -0.3944 | -1.20 | .114 | ----------------------------------------------------------------------------- | GROUP # | GROUP label | N | diff --git a/docs/function/bootbayes.html b/docs/function/bootbayes.html index 447058b..916bbe6 100644 --- a/docs/function/bootbayes.html +++ b/docs/function/bootbayes.html @@ -3,7 +3,7 @@ - + @@ -146,7 +146,7 @@

bootbayes

[3] Liu, Gelman & Zheng (2015). Simulation-efficient shortest probability intervals. Statistics and Computing, 25(4), 809–819. - bootbayes (version 2023.07.06) + bootbayes (version 2024.05.17) Author: Andrew Charles Penn https://www.researchgate.net/profile/Andrew_Penn/ @@ -182,7 +182,7 @@

Demonstration 1

******************************************************************************* Bootstrap settings: - Function: sum (w .* Y) + Function: sum (W * Y) Resampling method: Bayesian bootstrap Prior: Symmetric Dirichlet distribution (a = 0.8) Number of resamples: 1999 @@ -191,7 +191,7 @@

Demonstration 1

Posterior Statistics: original bias median stdev CI_lower CI_upper - +184.5 -0.02210 +184.5 1.240 +182.1 +186.9 + +184.5 +0.03471 +184.5 1.278 +182.0 +187.1

Demonstration 2

@@ -228,8 +228,8 @@

Demonstration 2

Posterior Statistics: original bias median stdev CI_lower CI_upper - +175.5 +0.03532 +175.5 2.384 +171.1 +180.3 - +0.1904 -0.001074 +0.1909 0.07912 +0.04160 +0.3442 + +175.5 +0.02190 +175.5 2.359 +171.3 +180.6 + +0.1904 -0.001762 +0.1898 0.07905 +0.02674 +0.3372

Package: statistics-resampling

diff --git a/docs/function/bootcdf.html b/docs/function/bootcdf.html index d4224b9..7113c46 100644 --- a/docs/function/bootcdf.html +++ b/docs/function/bootcdf.html @@ -3,7 +3,7 @@ - + @@ -49,7 +49,7 @@

bootcdf

'[x, F, P] = bootcdf (...)' also returns the distribution of P values. - bootcdf (version 2023.07.05) + bootcdf (version 2024.04.21) Author: Andrew Charles Penn https://www.researchgate.net/profile/Andrew_Penn/ diff --git a/docs/function/bootci.html b/docs/function/bootci.html index 9b77899..d3d7eef 100644 --- a/docs/function/bootci.html +++ b/docs/function/bootci.html @@ -3,7 +3,7 @@ - + @@ -153,7 +153,7 @@

bootci

vs. Smoothing; Proceedings of the Section on Statistics & the Environment. Alexandria, VA: American Statistical Association. - bootci (version 2023.07.04) + bootci (version 2024.05.13) Author: Andrew Charles Penn https://www.researchgate.net/profile/Andrew_Penn/ @@ -468,8 +468,8 @@

Demonstration 10

Produces the following output

ci =
 
-     -0.49903     -0.32048
-       0.1719      0.20754
+ -0.57173 -0.24514 + 0.03737 0.43932

Demonstration 11

diff --git a/docs/function/bootclust.html b/docs/function/bootclust.html index 8126d93..e20754d 100644 --- a/docs/function/bootclust.html +++ b/docs/function/bootclust.html @@ -3,7 +3,7 @@ - + @@ -145,7 +145,7 @@

bootclust

vs. Smoothing; Proceedings of the Section on Statistics & the Environment. Alexandria, VA: American Statistical Association. - bootclust (version 2024.04.02) + bootclust (version 2024.05.16) Author: Andrew Charles Penn https://www.researchgate.net/profile/Andrew_Penn/ @@ -376,8 +376,8 @@

Demonstration 7

Bootstrap Statistics: original bias std_error CI_lower CI_upper - +0.05661 +0.008427 +0.1783 -0.2258 +0.3597 - -0.5011 -0.01251 +0.2094 -0.8576 -0.1695 + -0.2887 -0.007187 +0.1870 -0.6013 +0.01715 + -0.1043 -0.008428 +0.2159 -0.4918 +0.2162

Demonstration 8

@@ -406,8 +406,8 @@

Demonstration 8

Bootstrap Statistics: original bias std_error CI_lower CI_upper - +0.03812 -0.01768 +0.1313 -0.2242 +0.2101 - +0.2485 -0.01351 +0.2831 -0.3207 +0.6026 + -0.04184 +0.007876 +0.1804 -0.3145 +0.2714 + +0.3486 +0.02326 +0.07954 +0.03027 +0.4184

Demonstration 9

diff --git a/docs/function/bootint.html b/docs/function/bootint.html index 81bf9fc..f38a3e6 100644 --- a/docs/function/bootint.html +++ b/docs/function/bootint.html @@ -3,7 +3,7 @@ - + diff --git a/docs/function/bootknife.html b/docs/function/bootknife.html index faee603..5963d01 100644 --- a/docs/function/bootknife.html +++ b/docs/function/bootknife.html @@ -3,7 +3,7 @@ - + @@ -181,7 +181,7 @@

bootknife

[9] Gleason, J.R. (1988) Algorithms for Balanced Bootstrap Simulations. The American Statistician. Vol. 42, No. 4 pp. 263-266 - bootknife (version 2023.07.04) + bootknife (version 2024.05.15) Author: Andrew Charles Penn https://www.researchgate.net/profile/Andrew_Penn/ @@ -442,8 +442,8 @@

Demonstration 8

Bootstrap Statistics: original bias std_error CI_lower CI_upper - -0.3468 -0.01215 +0.2650 -0.8105 +0.05247 - +0.5558 -0.01072 +0.2145 +0.1827 +0.8684 + -0.06082 +0.05229 +0.3349 -0.5908 +0.4742 + -0.1285 -0.04207 +0.2742 -0.6432 +0.1863

Demonstration 9

diff --git a/docs/function/bootlm.html b/docs/function/bootlm.html index 12ce3de..c1ff4fe 100644 --- a/docs/function/bootlm.html +++ b/docs/function/bootlm.html @@ -3,7 +3,7 @@ - + @@ -496,7 +496,7 @@

bootlm

installed and loaded, then these computations will be automatically accelerated by parallel processing on platforms with multiple processors - bootlm (version 2023.09.01) + bootlm (version 2024.05.17) Author: Andrew Charles Penn https://www.researchgate.net/profile/Andrew_Penn/ @@ -1032,12 +1032,12 @@

Demonstration 6

name mean CI_lower CI_upper N -------------------------------------------------------------------------------- -f, 0 +60.62 +57.41 +64.31 8 -m, 0 +66.87 +59.70 +73.74 8 +f, 0 +60.63 +57.41 +64.31 8 +m, 0 +66.88 +59.70 +73.74 8 f, 2 +62.50 +57.82 +66.98 8 -m, 2 +66.87 +57.88 +75.75 8 +m, 2 +66.88 +57.88 +75.75 8 f, 4 +57.50 +53.03 +62.83 8 -m, 4 +35.62 +28.28 +43.40 8 +m, 4 +35.63 +28.28 +43.40 8 MODEL FORMULA (based on Wilkinson's notation): @@ -1064,7 +1064,7 @@

Demonstration 6

f, 0 - f, 2 -1.875 -8.048 +4.133 1.000 f, 2 - f, 4 +5.000 -2.170 +12.04 .638 f, 0 - f, 4 +3.125 -3.402 +9.507 .966 -m, 0 - m, 2 -3.553e-15 -12.03 +11.70 1.000 +m, 0 - m, 2 +6.550e-15 -12.03 +11.70 1.000 m, 2 - m, 4 +31.25 +19.02 +43.41 <.001 m, 0 - m, 4 +31.25 +20.03 +41.98 <.001

and the following figure

@@ -1532,7 +1532,7 @@

Demonstration 10

diet:drug_2 -17.00 -37.94 +3.936 .104 diet:feedback_1 -16.00 -35.17 +3.172 .095 drug:feedback_1 -24.00 -42.08 -5.922 .011 -drug:feedback_2 -7.061e-14 -19.93 +19.93 1.000 +drug:feedback_2 -4.475e-14 -19.93 +19.93 1.000 diet:drug:feedback_1 +35.00 +7.926 +62.07 .013 diet:drug:feedback_2 +5.000 -24.39 +34.39 .737 diff --git a/docs/function/bootmode.html b/docs/function/bootmode.html index a8b6e22..b189bd6 100644 --- a/docs/function/bootmode.html +++ b/docs/function/bootmode.html @@ -3,7 +3,7 @@ - + @@ -149,9 +149,9 @@

Demonstration 1

Produces the following output

ans = Summary of results:
 
-ans = H1 is 1 with p = 0.0015 so reject the null hypothesisthat there is 1 mode
+ans = H1 is 1 with p = 0.001 so reject the null hypothesisthat there is 1 mode
 
-ans = H2 is 0 with p = 0.327 so accept the null hypothesis that there are 2 modes
+ans = H2 is 0 with p = 0.323 so accept the null hypothesis that there are 2 modes

Package: statistics-resampling

diff --git a/docs/function/bootstrp.html b/docs/function/bootstrp.html index f85f160..2d8a2b5 100644 --- a/docs/function/bootstrp.html +++ b/docs/function/bootstrp.html @@ -3,7 +3,7 @@ - + @@ -128,7 +128,7 @@

bootstrp

vs. Smoothing; Proceedings of the Section on Statistics & the Environment. Alexandria, VA: American Statistical Association. - bootstrp (version 2024.04.23) + bootstrp (version 2024.05.15) Author: Andrew Charles Penn https://www.researchgate.net/profile/Andrew_Penn/ diff --git a/docs/function/bootwild.html b/docs/function/bootwild.html index f560e9a..1507ebf 100644 --- a/docs/function/bootwild.html +++ b/docs/function/bootwild.html @@ -3,7 +3,7 @@ - + @@ -134,7 +134,7 @@

bootwild

[7] Sellke, Bayarri and Berger (2001) Calibration of p-values for Testing Precise Null Hypotheses. Am Stat. 55(1), 62-71 - bootwild (version 2023.07.05) + bootwild (version 2024.05.17) Author: Andrew Charles Penn https://www.researchgate.net/profile/Andrew_Penn/ @@ -170,7 +170,7 @@

Demonstration 1

******************************************************************************* Bootstrap settings: - Function: X \ y + Function: pinv (X) * y Resampling method: Wild bootstrap-t Number of resamples: 1999 Standard error calculations: Heteroscedasticity-Consistent (HC0) @@ -180,7 +180,7 @@

Demonstration 1

Test Statistics: original std_err CI_lower CI_upper t-stat p-val FPR - +184.5 +1.243 +181.6 +187.4 +148. <.001 .010 + +184.5 +1.243 +181.5 +187.5 +148. <.001 .010

Demonstration 2

@@ -208,7 +208,7 @@

Demonstration 2

******************************************************************************* Bootstrap settings: - Function: X \ y + Function: pinv (X) * y Resampling method: Wild bootstrap-t Number of resamples: 1999 Standard error calculations: Heteroscedasticity-Consistent (HC0) @@ -218,8 +218,8 @@

Demonstration 2

Test Statistics: original std_err CI_lower CI_upper t-stat p-val FPR - +175.5 +2.502 +169.8 +181.2 +70.1 <.001 .010 - +0.1904 +0.08261 +0.003534 +0.3773 +2.31 .047 .280 + +175.5 +2.502 +169.5 +181.5 +70.1 <.001 .010 + +0.1904 +0.08261 -0.003440 +0.3843 +2.31 .053 .298

Package: statistics-resampling

diff --git a/docs/function/cor.html b/docs/function/cor.html index 055e988..bb3828d 100644 --- a/docs/function/cor.html +++ b/docs/function/cor.html @@ -3,7 +3,7 @@ - + diff --git a/docs/function/credint.html b/docs/function/credint.html index ebf094b..a709b85 100644 --- a/docs/function/credint.html +++ b/docs/function/credint.html @@ -3,7 +3,7 @@ - + diff --git a/docs/function/deffcalc.html b/docs/function/deffcalc.html index dd523d1..2e4abcd 100644 --- a/docs/function/deffcalc.html +++ b/docs/function/deffcalc.html @@ -3,7 +3,7 @@ - + diff --git a/docs/function/images/boot1way_701.png b/docs/function/images/boot1way_701.png index 6aa9d49..419ba14 100644 Binary files a/docs/function/images/boot1way_701.png and b/docs/function/images/boot1way_701.png differ diff --git a/docs/function/images/boot1way_801.png b/docs/function/images/boot1way_801.png index da9607c..5c42cab 100644 Binary files a/docs/function/images/boot1way_801.png and b/docs/function/images/boot1way_801.png differ diff --git a/docs/function/images/bootlm_401.png b/docs/function/images/bootlm_401.png index 46f5b7b..fc8d556 100644 Binary files a/docs/function/images/bootlm_401.png and b/docs/function/images/bootlm_401.png differ diff --git a/docs/function/randtest.html b/docs/function/randtest.html index 1f3d916..af52835 100644 --- a/docs/function/randtest.html +++ b/docs/function/randtest.html @@ -3,7 +3,7 @@ - + @@ -146,8 +146,8 @@

Demonstration 2

Produces the following output

pval =
 
-      0.53148
-   0.00049014
+      0.54181
+   0.00032487
 
 stat =
 
@@ -173,7 +173,7 @@ 
Demonstration 3

  % of standardized x and y values.
  [pval, stat] = randtest (X, Y, 5000, @cor)

Produces the following output

-
pval = 0.0002
+
pval = 0.00039217
 stat = 0.72317

 
 
diff --git a/docs/function/randtest1.html b/docs/function/randtest1.html
index ecd9421..d0f8b97 100644
--- a/docs/function/randtest1.html
+++ b/docs/function/randtest1.html
@@ -3,7 +3,7 @@
 
   
   
-  
+  
   
   
   
diff --git a/docs/function/randtest2.html b/docs/function/randtest2.html
index 84dd7e1..140e18c 100644
--- a/docs/function/randtest2.html
+++ b/docs/function/randtest2.html
@@ -3,7 +3,7 @@
 
   
   
-  
+  
   
   
   
@@ -162,9 +162,9 @@ 
Demonstration 1

                            @(A, B) log (var (A) ./ var (B)))

Produces the following output

-
pval = 0.3668
-pval = 0.2698
-pval = 0.30905
+
pval = 0.3674
+pval = 0.2856
+pval = 0.3168

Demonstration 2

diff --git a/docs/function/sampszcalc.html b/docs/function/sampszcalc.html index 93e079a..fa3537b 100644 --- a/docs/function/sampszcalc.html +++ b/docs/function/sampszcalc.html @@ -3,7 +3,7 @@ - + diff --git a/docs/function/smoothmad.html b/docs/function/smoothmad.html index 4c711bd..da665c0 100644 --- a/docs/function/smoothmad.html +++ b/docs/function/smoothmad.html @@ -3,7 +3,7 @@ - + diff --git a/docs/function/smoothmedian.html b/docs/function/smoothmedian.html index e178843..3017ee5 100644 --- a/docs/function/smoothmedian.html +++ b/docs/function/smoothmedian.html @@ -3,7 +3,7 @@ - + diff --git a/docs/function_reference.html b/docs/function_reference.html index ef39982..ec7dd4d 100644 --- a/docs/function_reference.html +++ b/docs/function_reference.html @@ -3,7 +3,7 @@ - + diff --git a/docs/index.html b/docs/index.html index 1ad6429..33e67e4 100644 --- a/docs/index.html +++ b/docs/index.html @@ -3,7 +3,7 @@ - + @@ -27,8 +27,8 @@

About this package

- - + +
Package Version:5.5.12
Last Release Date:2024-05-15
Package Version:5.5.13
Last Release Date:2024-05-17
Package Author:Andrew Penn <andy.c.penn@gmail.com>
Package Maintainer:Andrew Penn <andy.c.penn@gmail.com>
License:GPLv3+