v0.1.10

bump igv.js (#21)

v0.1.9

handle empty lines in --sites file
bump igv.js to 2.12.2
warn when no genome or fasta is specified
better for BED, e.g. show a bar for each bed region

v0.1.8

always output header for --annotation files (fixes VCF)

v0.1.7

breaking: change --template to --prefix

v0.1.5

add --template option to allow for each variant or site to be written to a separte js (or base64) file. this allows a user to scale to as many variants as they like.

v0.1.4

handle and report weird AD values

v0.1.3

expose --flank option so user can specify size of flanking region to extract
allow linking by chrom:pos:ref:alt (in addition to region chrom:start-stop)

v0.1.2

if no --sample use first affected sample from pedigree file

v0.1.1

support BED as input

v0.1.0

rewrite so no server is needed

v0.0.8

show help when run with no args (#7)
allow injection of custom javascript to affect options and option.tracks (#4)

v0.0.7

css from @brwnj
better positioning of variant within window when using ->, <- arrow keys for SVs
more concise popover for alignment track click
given a VCF and no --region specified, the viewer will open at the first variant
alignment track-height is larger when fewer tracks.

v0.0.6

more fixes for custom reference+cram

v0.0.5

styling and left/right buttons by Joe Brown
better aesthetics (sized to fit a trio of bams +variant track in a laptop screen)
update readme to include directions on how to generate screenshots
fix for custom reference + cram
bump igv.js version to 2.4.1

v0.0.4

navigation along VCF variants with left/right arrows.

v0.0.3

color alignments by strand and set height to 10 by default
guess type by file extension for remote files