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NGSDExportGenes tool help

NGSDExportGenes (2021_03-16-ge75f73c2)

Lists genes from NGSD.

Optional parameters:
  -out <file>        Output TSV file. If unset, writes to STDOUT.
                     Default value: ''
  -add_disease_info  Annotate with disease information from HPO, OrphaNet and OMIM (slow).
                     Default value: 'false'
  -test              Uses the test database instead of on the production database.
                     Default value: 'false'

Special parameters:
  --help             Shows this help and exits.
  --version          Prints version and exits.
  --changelog        Prints changeloge and exits.
  --tdx              Writes a Tool Definition Xml file. The file name is the application name with the suffix '.tdx'.

NGSDExportGenes changelog

NGSDExportGenes 2021_03-16-ge75f73c2

2021-04-13 Added more information (imprinting, pseudogenes, OrphaNet, OMIM).
2019-09-20 Added several columns with gene details.
2018-05-03 First version

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