A summary of all past [[http://wiki.na-mic.org/Wiki/index.php/Project_Events#Past_Project_Weeks|Project Events]].
{| ! [[image:SPWW_Summer2017.png|225px]] ! [[image:birc.jpg|225px]] ! [[image:CANARIE_v.png|225px]] |}
=26th Slicer Project Week and 1st Slicer IGT Project Week=
It is a pleasure to announce that the Western Slicer Project Week will be held in London, Ontario, Canada on July 17-21, 2017. This is the first extension Slicer project week that grew organically from a proposed visit of Dr. Nobuhiko Hata to Western. Enough interest existed to propose a small Slicer hackfest, which quickly grew into a full blown project week. With the expansion of the hackfest into a full project week, an additional meeting was arranged in conjunction with SPWW to discuss and develop image-guided therapy specific goals. Thus, this is also the inaugural Slicer IGT Project Week.
This project week is an event endorsed by the [http://www.miccai.org/organization MICCAI Society].
[[File:Group shot.jpg|center|1000px]]
=='''Feedback'''== ''' Please complete the survey [https://www.surveymonkey.com/r/ZZ3YH3R here]. '''
==Mailing List== Please send an email to [mailto:[email protected] [email protected]] to be put on the mailing list.
==REGISTRATION== Registration is now closed. For inquiries please contact the organizing committee.
==Local Organizing Committee== *[http://www.robarts.ca/terry-peters Terry Peters] *[http://www.birc.ca/contact-birc Jackie Williams] *[https://www.khanlab.ca/ Ali Khan]
==Hangouts for preparation== Bi-weekly Hangouts will be held prior to the event. Please sign up for a Hangout if you have project ideas or suggestions for the event.
- (Adam Rankin) Hangout #1: '''May 18th 1.00 PM EDT''' (GMT-4): Welcome and overview of the project week [https://plus.google.com/u/0/events/cbpe1ku1upiuomv3r6kuea4rnd0 event page] ([[SPWW Hangouts Notes|Notes]])
- (Adam Rankin) Hangout #2: '''June 1st 1.00 PM EDT''' (GMT-4): VR and Slicer: necessary steps to enable Slicer scene visualization within a VR environment [https://plus.google.com/u/0/events/c0rgj5idnfsdji7tpjr8vu3ekd4 event page]
- (Adam Rankin) Hangout #3: '''June 15th 1.00 PM EDT''' (GMT-4): Slicelets: You can get rid of those buttons!? [https://plus.google.com/u/0/events/c80d9oit70e6nmmjnssgphv4ggg event page]
==Accommodation==
- Please arrange your own accommodation. Nearby options include: ** [http://www.stayatwestern.ca/ Western Summer Accommodations] ** [http://guesthouseonthemount.ca/ Guest House on the Mount] ** [https://windermeremanor.com/ Windermere Manor]
==Dates== July 17-21, 2017
==Location== [https://www.google.ca/maps/place/Robarts+Research+Institute,+London,+ON+N6G+2V4/@43.0117945,-81.2759126,17z/data=!3m1!4b1!4m5!3m4!1s0x882eee15f7063301:0xddd8df04a10c8ad7!8m2!3d43.0117613!4d-81.2738213 Robarts Research Institute, London, ON, Canada]
[https://www.google.ca/maps/@43.0113772,-81.2738127,3a,75y,322.68h,82.51t/data=!3m6!1e1!3m4!1svNjMJcK8VMA9V-3RaJci0A!2e0!7i13312!8i6656 Access via front doors]
==Resources== This is a collection of resources submitted by attendees
- [[Media:20170717-Robarts-SlicerBasics.pdf|Welcome presentation by Andras Lasso]]
- [[Media:2017-slicer.pptx|Historical overview by Nobuhiko Hata]]
- Python resources (thanks John Drozd!) ** http://cscircles.cemc.uwaterloo.ca/5-input/ ** https://www.jetbrains.com/pycharm/ ** http://www.datacarpentry.org/python-ecology-lesson/
= '''Schedule''' = {{#widget:Google Calendar |id=[email protected] |color=2952A3 |title=Slicer Project Week Western }}
= '''Projects''' = *Use this [[2017_Project_Week_Template | Updated Template for project pages]]
== Virtual/Augmented Reality == #[[2017 Slicer Western Week/Virtual Reality and Slicer| Enabling virtual reality (OpenVR) for Slicer]] (Adam Rankin)
== Segmentation and Classification == #[[2017 Slicer Western Week/Peripheral Angiosome Identification| Identifying angiosomes in the lower leg]] (Michael Schumaker, Andrei Mouraviev, Edward Ntiri) #[[2017 Slicer Western Week/3D Anatomical Segmentation to Improve Gross Anatomy | 3D Anatomical Segmentation to Improve Gross Anatomy]] (Steven Lewis) #[[2017 Slicer Western Week/Automated Segmentation of the human skull, face and airways from MRI dicom images | Automated Segmentation of the human skull, face and airways from MRI dicom images]] (John Drozd) #[[2017 Slicer Western Week/Laplace equation solver| Module for computing Laplace field over a volume of interest]] (Jordan DeKraker) #[[2017 Slicer Western Week/Sigmoid Sinus Segmentation | Sigmoid Sinus Segmentation]] (Daniel Allen, Brad Gare, Clara Tam) #[[2017 Slicer Western Week/Autosegmentation of the Uterus|Auto-segmentation of the uterus in 3D-slicer and bridge to MATLAB ]] (Nadeem Naim) #[[2017 Slicer Western Week/VB Segmentation Object recognition Deep Learning|Vertebral Body Segmentation and Object recognition using Deep Learning Networks]] (Michael Hardisty) #[[2017 Slicer Western Week/Python Phantom Segmentation Script|Python Phantom Segmentation Script]] (Colin McCurdy) #[[2017 Slicer Western Week/Automating semi-automatic ventricle segmentation algorithm|Automating semi-automatic ventricle segmentation algorithm]] (Nuwan Nanayakkara)
== Image Guided Interventions == #[[2017 Slicer Western Week/PI-RADS for MR Guided Prostate Procedures| Prostate Imaging Reporting]] (Nicole Aucoin, Nobuhiko Hata) #[[2017 Slicer Western Week/ROS-IGTL-Bridge | Integration of 3D Slicer and ROS]] (Junichi Tokuda) #[[2017 Slicer Western Week/AR guidance system for Needle Interventions| AR-ultrasound module]] (Goli Ameri, Adam Rankin)
== Registration == #[[2017 Slicer Western Week/CTP image registration| 4D Registration]] (Feng Su, Claire Vannelli, Mohamed Moselhy) #[[2017 Slicer Western Week/hand eye calibration| Hand-Eye Calibration Module]] (Isabella Morgan, Elvis Chen) #[[2017 Slicer Western Week/landmark registration| Ex-vivo to in-vivo Registration Procedure]] (Geetika Gupta)
== Clinical == #[[2017 Slicer Western Week/Clinical Teaching Tool| Image Quizzer]] (Carol Johnson) #[[2017 Slicer Western Week/Calculating LVEF| Calculating LVEF]] (Ben Wilk) #[[2017 Slicer Western Week/sEEG visualization| sEEG Visuallization]] (Kristin Ikeda)
== Infrastructure == #[[2017 Slicer Western Week/CIFTI File Integration| CIFTI File Integration Module]] (Hossein Rejali) #[[2017 Slicer Western Week/Dataprobe for 3D Viewer| Dataprobe for models in the 3D viewer]] (Jason Kai)
= '''Breakout sessions''' =
- 3D Slicer introduction ** [https://1drv.ms/b/s!Arm_AFxB9yqHsIVjPU5w0WskDFhJsA 3D Slicer features overview (Andras Lasso)]
- Segmentation ** [https://www.slicer.org/wiki/Documentation/Nightly/Training#Slicer4_3D_Printing Segment editor tutorials (video tutorial and slides)] ** [http://slicer.readthedocs.io/en/latest/user_guide/module_segmenteditor.html Segment editor reference manual]
- Slicelets ** [https://1drv.ms/b/s!Arm_AFxB9yqHsIVkYnMd6OrLmqKMgw Customizing 3D Slicer: slicelets/guidelets (Andras Lasso)] ** [https://www.slicer.org/wiki/Documentation/Nightly/Training#Slicer4_Programming_Tutorial Slicer programming tutorial] ** [https://github.com/VASST/SliceletsTemplate VASST Lab Slicelet Template (Thanks Ying Li!)]
- SlicerIGT ** [https://www.youtube.com/user/perklabresearch/videos?sort=dd&view=0&shelf_id=0 PerkLab videos]
= '''Attendees''' =