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DESCRIPTION
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Package: prioGene
Type: Package
Title: Candidate Gene Prioritization for Non-Communicable Diseases Based on Functional Information
Version: 1.0.0
Authors@R: person(given = "Erqiang", family = "Hu", email = "[email protected]", role = c("aut", "cre"))
biocViews: GraphAndNetwork, FunctionalGenomics, Genetics, Network
Description: In gene sequencing methods, the topological features of protein-protein interaction (PPI) networks are
often used, such as ToppNet <https://toppgene.cchmc.org>. In this study, a candidate gene prioritization method
was proposed for non-communicable diseases considering disease risks transferred between genes in weighted disease
PPI networks with weights for nodes and edges based on functional information.
Depends: R (>= 3.6.0)
License: Artistic-2.0
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.0.2
Suggests:
knitr,
rmarkdown,
testthat
VignetteBuilder: knitr
Imports:
AnnotationDbi,
org.Hs.eg.db