Releases and Roadmap

Web services

This section contains some web services that could be used to query OpenCGA in the future.

"import"/"export": return file formats

http://imedina:8080/eva/study/1000g,ESV/export?1000g=s1,s2&ESV=s1,s4 http://imedina:8080/opencga/rest/{storage/study}/public/1000g/1000g.vcf/export

Query parameters:

• "filters": region, samples, CT, SNV/INDEL, ...
• format: VCF, csv, ...
• merge?

Queries by sample/study: return objects (json/protobuf)

http://imedina:8080/opencga/rest/storage/public/1000g,ESV/query?1000g=s1,s2&ESV=s1,s2&region=3:444-6666

Query parameters:

• "filters": region, samples?, CT, SNV/INDEL, ...
• output type: json/protobuf
• ...

Queries by id: return objects (json/protobuf)

http://imedina:8080/opencga/variation/rs666/fetch