115_gnu_plot_denoise_plate1.gnu

#!/usr/local/bin/gnuplot

# Output W3C Scalable Vector Graphics
set terminal svg size 1300, 375 font "Menlo,12"

# Set plot size
set size 1,1

# Set graph title
set title 'Plate 1 read counts after DADA2 denoising.'

# Set label of x-axis
set xlabel 'FastQ file'

# Set label of y-axis
set ylabel 'Reads at Stage'

# Use a histogram
set style data histogram

# Use clustered histogram (gap size of 1 makes xtics position better)
set style histogram clustered gap 1

# Use a solid fill style for histogram bars
set style fill solid 1 noborder

# Rotate x-axis labels by 60 degrees
set xtics rotate by 60 right
set xtics font "Menlo,10"

# define output path
set output "../Zenodo/Processing/115_gnu_plot_denoise_plate1.svg"

# Plot data from a file, with extra notes below:
#
# for [i=2:5]         Loop for values of i between 2 and 5 (inclusive)
# using i:xtic(1)     Plot column i using tick labels from column 1
# title columnheader  Use the column headers (first row) as titles
# linewidth 4         Use a wideplotr line width

# plot
plot for [i=2:5]  "../Zenodo/Processing/110_18S_denoised-stt_run_1_mod.txt" using i:xtic(1) title columnheader linewidth 4