diff --git a/.github/workflows/python_tests.yml b/.github/workflows/python_tests.yml index 59164a2..b2502a2 100644 --- a/.github/workflows/python_tests.yml +++ b/.github/workflows/python_tests.yml @@ -15,15 +15,14 @@ jobs: runs-on: ${{ matrix.platform }} steps: - - uses: actions/checkout@v4 - - name: Set up Python ${{ matrix.python-version }} - uses: actions/setup-python@v5 - with: - python-version: ${{ matrix.python-version }} - - name: Install dependencies - run: | - python -m pip install --upgrade pip setuptools wheel - pip install -e .[test] - - name: Test with pytest - run: | - pytest -v + - uses: actions/checkout@v4 + - name: Install uv + uses: astral-sh/setup-uv@v4 + - name: Set up Python ${{ matrix.python-version }} + uses: actions/setup-python@v5 + with: + python-version: ${{ matrix.python-version }} + - name: Install dependencies + run: uv sync --all-extras --dev + - name: Run tests + run: uv run pytest diff --git a/pyproject.toml b/pyproject.toml index 026fbba..aea5179 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -1,22 +1,95 @@ -[tool.pyright] -include = ["nbank"] - [build-system] -requires = ["setuptools", "wheel"] -build-backend = "setuptools.build_meta" +requires = ["hatchling"] +build-backend = "hatchling.build" + +[project] +name = "neurobank" +dynamic = ["version"] +description = "Simple data management system for neuroscience" +readme = "README.rst" +license = {text = "BSD 3-Clause License"} +authors = [ + {name = "Dan Meliza", email = "dan@meliza.org"}, +] +maintainers = [ + {name = "Dan Meliza", email = "dan@meliza.org"}, +] +classifiers = [ + "Development Status :: 4 - Beta", + "Intended Audience :: Science/Research", + "License :: OSI Approved :: BSD License", + "Programming Language :: Python", + "Programming Language :: Python :: 3.7", + "Programming Language :: Python :: 3.8", + "Programming Language :: Python :: 3.9", + "Programming Language :: Python :: 3.10", + "Programming Language :: Python :: 3.11", + "Programming Language :: Python :: 3.12", + "Topic :: Scientific/Engineering", + "Operating System :: Unix", + "Operating System :: POSIX :: Linux", + "Operating System :: MacOS :: MacOS X", + "Natural Language :: English", +] +requires-python = ">=3.7" +dependencies = [ + "httpx>=0.24", +] + +[dependency-groups] +dev = [ + "pytest>=7.0", + "respx>=0.20", + "ruff>=0.7.0" +] + +[project.urls] +Homepage = "https://github.com/melizalab/neurobank" + +[project.scripts] +nbank = "nbank.script:main" + +[tool.hatch.version] +path = "nbank/__init__.py" + +[tool.black] +line-length = 88 +target-version = ["py310"] +include = '\.pyi?$' + +[tool.pytest.ini_options] +python_files = ["test_*.py", "*_test.py"] +addopts = "-v" +testpaths = ["test"] [tool.ruff] -target-version = "py37" -extend-exclude = ["attic"] +line-length = 88 +target-version = "py310" [tool.ruff.lint] extend-select = [ + "E", # pycodestyle errors + "W", # pycodestyle warnings + "F", # pyflakes "B", # flake8-bugbear "I", # isort "PGH", # pygrep-hooks "RUF", # Ruff-specific "UP", # pyupgrade ] +ignore = ["E221", "E501", "E701"] + +[tool.ruff.lint.per-file-ignores] +"__init__.py" = ["F401"] [tool.mypy] -ignore_missing_imports = true \ No newline at end of file +python_version = "3.8" +ignore_missing_imports = true +strict_optional = true +check_untyped_defs = true + +[tool.hatch.build] +include = ["nbank/**"] +exclude = ["*test*"] +artifacts = ["README.rst"] + diff --git a/setup.cfg b/setup.cfg deleted file mode 100644 index cd01fd7..0000000 --- a/setup.cfg +++ /dev/null @@ -1,52 +0,0 @@ -[pep8] -ignore=E221,E501,E701,C901 - -[metadata] -name = neurobank -version = attr: nbank.__version__ -description = Simple data management system for neuroscience -long_description = file: README.rst -long_description_content_type = text/x-rst -license = BSD 3-Clause License -classifiers = - Development Status :: 4 - Beta - Intended Audience :: Science/Research - License :: OSI Approved :: BSD License - Programming Language :: Python - Programming 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