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Not finalized, but in #1081 I'm exposing a mapping (dict[int, list[_BaseVirtualSiteKey]]) between molecule indices and the virtual sites included in them. Here's an example of a TIP4P dimer:
In English: molecules 0 and 1 each have (1-length) lists of virtual sites, each list containing some information about the atoms they're associated with.
Description
Please describe the behavior you would like added to Interchange.
#1051 (comment)
(Need to add more context)
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