Repositories list

• cocomo

  Public
  R

  •

  GNU General Public License v3.0

  •1•1•0•0•Updated Jan 7, 2025Jan 7, 2025

• eas-coding-workshops

  Public
  HTML

  •0•4•0•1•Updated Dec 19, 2024Dec 19, 2024

• Eobs_Data_Reader

  Public
  R function designed to automate the pre-processing of Acceleration, Magnetometry, and Orientation data collected from Eobs devices

  R

  •

  MIT License

  •1•0•0•0•Updated Dec 3, 2024Dec 3, 2024

• GPS_Screener

  Public
  R-based tool for automatically detecting anomalies in GPS data

  R

  •

  MIT License

  •1•0•0•0•Updated Dec 3, 2024Dec 3, 2024

• Agent-Based_Fundamental_Steps_and_Turns_Simulation-

  Public
  An individual-based model that predicts the movement paths of animals by incorporating empirical distributions of fundamental step lengths (Fstepdistance), turn angles (Fturnangle), and compass headings (H) derived from dead-reckoned data

  R

  •

  MIT License

  •1•0•0•0•Updated Nov 19, 2024Nov 19, 2024

• telephone2024fall

  Public
  Playground for git workshop 2024-11-19.

  R

  •

  Other

  •0•0•0•2•Updated Nov 19, 2024Nov 19, 2024

• dygraphs-visualization

  Public
  Generate an interactive dygraph for multiple time series columns with options fo customizable colors, and integrated plugins for enhanced interactivity, and event highlighting.

  R

  •

  MIT License

  •1•0•0•0•Updated Nov 18, 2024Nov 18, 2024

• dipteryx_sampling_sims

  Public
  R

  •

  Creative Commons Zero v1.0 Universal

  •0•0•0•0•Updated Oct 30, 2024Oct 30, 2024

• Biotropica_Mammals-Timber-Plantations

  Public
  0•0•0•0•Updated Oct 29, 2024Oct 29, 2024

• Biotropica-Capuchin-Agouti

  Public
  R

  •0•0•0•0•Updated Oct 8, 2024Oct 8, 2024

• Animal-IMU-Peak-Finder

  Public
  An R function to identify local peaks (maxima) and troughs (negative peaks) in motion sensor data. Supports customizable height thresholds, baseline subtraction, marked event filtering, and optional visualization of the detected peaks.

  R

  •

  MIT License

  •1•0•0•0•Updated Oct 5, 2024Oct 5, 2024

• Movement-Verified-GPS-Filtering-Protocol

  Public
  R script and example dataset to implement the Movement Verified Filtering (MVF) Protocol, designed to classify genuine movement in animals from high-resolution GPS and motion sensor data [DOI:https://doi.org/10.1098/rsif.2021.0692].

  R

  •

  MIT License

  •1•0•0•0•Updated Oct 4, 2024Oct 4, 2024

• Calculating-Animal-Heading

  Public
  An R function for tilt-compensated compass computation using accelerometer and magnetometer data. Supports soft/hard iron calibration, quaternion-based orientation calculations, tag rotation correction, and outputs body orientation angles (pitch, roll, yaw/heading).

  R

  •

  MIT License

  •1•0•0•0•Updated Oct 4, 2024Oct 4, 2024

• Animal-Dead-Reckoning-In-R

  Public
  Gundog.Tracks: An R script for Dead-Reckoning Animal Movement with optional Verified Position Correction.

  R

  •

  MIT License

  •0•0•0•0•Updated Oct 4, 2024Oct 4, 2024

• E-Obs-Schedule-Optimizer

  Public
  Shiny app for configuring E-Obs GPS/IMU schedules, estimating battery life and memory usage, and setting delayed start times.

  R

  •

  MIT License

  •1•0•0•0•Updated Oct 4, 2024Oct 4, 2024

• denningersnyder_tza_wildlife_conflict_code

  Public
  HW Conflict Data around Reserves

  TeX

  •1•0•0•0•Updated Sep 30, 2024Sep 30, 2024

• animal2vec

  Public
  animal2vec: A self-supervised transformer for rare-event raw audio input

  deep-learningtransformerbioacoustics

  Python

  •

  MIT License

  •1•18•1•0•Updated Jul 26, 2024Jul 26, 2024

• EAS

  Public archive
  Ecology of Animal Societies - GitHub Mainpage

  HTML

  •0•1•0•0•Updated Jul 16, 2024Jul 16, 2024

• methods_support_repository

  Public archive
  Archived documentation of a program that ran 2021-2022 to offer methods support to members of MPI AB EAS Dept.

  HTML

  •0•0•0•0•Updated Jul 16, 2024Jul 16, 2024

• telephone2024

  Public
  Playground for git workshop 2024-04-16.

  R

  •

  Other

  •0•0•0•1•Updated Apr 17, 2024Apr 17, 2024

• data_catalog_entry_form_shiny_yml

  Public archive
  R

  •0•1•0•1•Updated Mar 4, 2024Mar 4, 2024

• montgomery_hyena_mobbing

  Public
  Data and code associated with manuscript "Determinants of hyena participation in risky collective action" doi: 10.1098/rspb.2023.1390

  R

  •2•0•0•0•Updated Nov 12, 2023Nov 12, 2023

• jacobson_CH1_Sampling

  Public
  odd chapter 1 ijp sampling paper

  1•0•0•0•Updated Oct 13, 2023Oct 13, 2023

• planet

  Public
  0•0•0•0•Updated Oct 13, 2023Oct 13, 2023

• fieldDataProcessing

  Public
  R

  •0•0•0•0•Updated Sep 6, 2023Sep 6, 2023

• pminasandra_hyena-acc

  Public
  Code for "Accelerometer-based predictions of behaviour elucidate factors affecting the daily activity patterns of spotted hyenas"

  Python

  •

  GNU Affero General Public License v3.0

  •1•0•0•0•Updated Sep 6, 2023Sep 6, 2023

• goldsborough_tooltides

  Public
  Data and code for project on tool use and tidal cycles in white-faced capuchins

  R

  •1•0•0•0•Updated Jul 10, 2023Jul 10, 2023

• strauss2023_inheritance

  Public
  R

  •2•0•0•0•Updated Mar 7, 2023Mar 7, 2023

• barrett_multinomial_freq_beyond_two

  Public
  Repo for paper and multinomial puzzlebox sim paper

  R

  •1•0•0•0•Updated Oct 7, 2022Oct 7, 2022

• averly_Meerkat_TurnSpeed_Influence

  Public
  Code from Averly et al. 2022 "Disentangling influence over group speed and direction reveals multiple patterns of influence in moving meerkat groups"

  R

  •2•0•0•0•Updated Jul 27, 2022Jul 27, 2022