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poseidon-eager.yml
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name: poseidon-eager
channels:
- bioconda
- conda-forge
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=2_gnu
- _r-mutex=1.0.1=anacondar_1
- alsa-lib=1.2.7.2=h166bdaf_0
- binutils_impl_linux-64=2.40=hf600244_0
- bwidget=1.9.14=ha770c72_1
- bzip2=1.0.8=h7f98852_4
- c-ares=1.18.1=h7f98852_0
- ca-certificates=2024.7.4=hbcca054_0
- cairo=1.16.0=ha61ee94_1014
- coreutils=8.25=1
- curl=7.86.0=h2283fc2_1
- expat=2.5.0=hcb278e6_1
- font-ttf-dejavu-sans-mono=2.37=hab24e00_0
- font-ttf-inconsolata=3.000=h77eed37_0
- font-ttf-source-code-pro=2.038=h77eed37_0
- font-ttf-ubuntu=0.83=hab24e00_0
- fontconfig=2.14.2=h14ed4e7_0
- fonts-conda-ecosystem=1=0
- fonts-conda-forge=1=0
- freetype=2.12.1=hca18f0e_1
- fribidi=1.0.10=h36c2ea0_0
- gcc_impl_linux-64=12.2.0=hcc96c02_19
- gettext=0.21.1=h27087fc_0
- gfortran_impl_linux-64=12.2.0=h55be85b_19
- giflib=5.2.1=h0b41bf4_3
- gmp=6.3.0=h59595ed_1
- graphite2=1.3.13=h58526e2_1001
- gsl=2.7=he838d99_0
- gxx_impl_linux-64=12.2.0=hcc96c02_19
- harfbuzz=5.3.0=h418a68e_0
- icu=70.1=h27087fc_0
- jpeg=9e=h0b41bf4_3
- kernel-headers_linux-64=2.6.32=he073ed8_15
- keyutils=1.6.1=h166bdaf_0
- krb5=1.19.3=h08a2579_0
- lcms2=2.15=hfd0df8a_0
- ld_impl_linux-64=2.40=h41732ed_0
- lerc=4.0.0=h27087fc_0
- libblas=3.9.0=16_linux64_openblas
- libcblas=3.9.0=16_linux64_openblas
- libcups=2.3.3=h3e49a29_2
- libcurl=7.86.0=h2283fc2_1
- libdeflate=1.17=h0b41bf4_0
- libedit=3.1.20191231=he28a2e2_2
- libev=4.33=h516909a_1
- libexpat=2.5.0=hcb278e6_1
- libffi=3.4.2=h7f98852_5
- libgcc=7.2.0=h69d50b8_2
- libgcc-devel_linux-64=12.2.0=h3b97bd3_19
- libgcc-ng=12.2.0=h65d4601_19
- libgfortran-ng=12.2.0=h69a702a_19
- libgfortran5=12.2.0=h337968e_19
- libglib=2.76.2=hebfc3b9_0
- libgomp=12.2.0=h65d4601_19
- libiconv=1.17=h166bdaf_0
- liblapack=3.9.0=16_linux64_openblas
- libnghttp2=1.52.0=h61bc06f_0
- libnsl=2.0.0=h7f98852_0
- libopenblas=0.3.21=pthreads_h78a6416_3
- libpng=1.6.39=h753d276_0
- libsanitizer=12.2.0=h46fd767_19
- libsqlite=3.40.0=h753d276_1
- libssh2=1.10.0=hf14f497_3
- libstdcxx-devel_linux-64=12.2.0=h3b97bd3_19
- libstdcxx-ng=12.2.0=h46fd767_19
- libtiff=4.5.0=h6adf6a1_2
- libuuid=2.38.1=h0b41bf4_0
- libwebp-base=1.3.0=h0b41bf4_0
- libxcb=1.13=h7f98852_1004
- libxml2=2.10.3=hca2bb57_4
- libzlib=1.2.13=h166bdaf_4
- make=4.3=hd18ef5c_1
- ncurses=6.3=h27087fc_1
- nextflow=21.04.0=h4a94de4_0
- openjdk=11.0.15=hea3dc9f_3
- openssl=3.3.1=h4ab18f5_1
- pango=1.50.12=h382ae3d_0
- pcre2=10.40=hc3806b6_0
- pip=23.1.1=pyhd8ed1ab_0
- pixman=0.40.0=h36c2ea0_0
- poseidon-trident=1.5.4.0=hf48d1a7_0
- pthread-stubs=0.4=h36c2ea0_1001
- python=3.9.16=h2782a2a_0_cpython
- r-assertthat=0.2.1=r41hc72bb7e_3
- r-backports=1.4.1=r41h06615bd_1
- r-base=4.1.3=h2f963a2_5
- r-bit=4.0.5=r41h06615bd_0
- r-bit64=4.0.5=r41h06615bd_1
- r-blob=1.2.4=r41hc72bb7e_0
- r-brio=1.1.3=r41h06615bd_1
- r-callr=3.7.3=r41hc72bb7e_0
- r-cli=3.6.1=r41h38f115c_0
- r-crayon=1.5.2=r41hc72bb7e_1
- r-dbi=1.1.3=r41hc72bb7e_1
- r-dbplyr=2.1.1=r41hc72bb7e_0
- r-desc=1.4.2=r41hc72bb7e_1
- r-diffobj=0.3.5=r41h06615bd_1
- r-digest=0.6.31=r41h38f115c_0
- r-dplyr=1.0.7=r41h03ef668_0
- r-ellipsis=0.3.2=r41h06615bd_1
- r-evaluate=0.20=r41hc72bb7e_0
- r-fansi=1.0.4=r41h133d619_0
- r-fs=1.6.1=r41h38f115c_0
- r-generics=0.1.3=r41hc72bb7e_1
- r-glue=1.6.2=r41h06615bd_1
- r-hash=3.0.1=r41hc72bb7e_3
- r-jsonlite=1.8.4=r41h133d619_0
- r-lifecycle=1.0.2=r41hc72bb7e_0
- r-magrittr=2.0.1=r41hcfec24a_1
- r-pillar=1.9.0=r41hc72bb7e_0
- r-pkgconfig=2.0.3=r41hc72bb7e_2
- r-pkgload=1.3.2=r41hc72bb7e_0
- r-praise=1.0.0=r41hc72bb7e_1006
- r-processx=3.8.1=r41h133d619_0
- r-ps=1.7.5=r41h133d619_0
- r-purrr=0.3.4=r41hcfec24a_1
- r-r.methodss3=1.8.2=r41hc72bb7e_1
- r-r.oo=1.25.0=r41hc72bb7e_1
- r-r.utils=2.10.1=r41hc72bb7e_0
- r-r6=2.5.1=r41hc72bb7e_1
- r-rematch2=2.1.2=r41hc72bb7e_2
- r-rlang=1.0.5=r41h7525677_0
- r-rprojroot=2.0.3=r41hc72bb7e_1
- r-testthat=3.0.4=r41h03ef668_0
- r-tibble=3.1.4=r41hcfec24a_0
- r-tidyselect=1.1.1=r41hc72bb7e_0
- r-utf8=1.2.3=r41h133d619_0
- r-vctrs=0.4.2=r41h7525677_1
- r-waldo=0.4.0=r41hc72bb7e_1
- r-withr=2.5.0=r41hc72bb7e_1
- readline=8.2=h8228510_1
- sed=4.8=he412f7d_0
- setuptools=67.7.1=pyhd8ed1ab_0
- sysroot_linux-64=2.12=he073ed8_15
- tk=8.6.12=h27826a3_0
- tktable=2.10=hb7b940f_3
- wheel=0.40.0=pyhd8ed1ab_0
- xorg-fixesproto=5.0=h7f98852_1002
- xorg-inputproto=2.3.2=h7f98852_1002
- xorg-kbproto=1.0.7=h7f98852_1002
- xorg-libice=1.0.10=h7f98852_0
- xorg-libsm=1.2.3=hd9c2040_1000
- xorg-libx11=1.8.4=h0b41bf4_0
- xorg-libxau=1.0.9=h7f98852_0
- xorg-libxdmcp=1.1.3=h7f98852_0
- xorg-libxext=1.3.4=h0b41bf4_2
- xorg-libxfixes=5.0.3=h7f98852_1004
- xorg-libxi=1.7.10=h7f98852_0
- xorg-libxrender=0.9.10=h7f98852_1003
- xorg-libxt=1.2.1=h7f98852_2
- xorg-libxtst=1.2.3=h7f98852_1002
- xorg-recordproto=1.14.2=h7f98852_1002
- xorg-renderproto=0.11.1=h7f98852_1002
- xorg-xextproto=7.3.0=h0b41bf4_1003
- xorg-xproto=7.0.31=h7f98852_1007
- xz=5.2.6=h166bdaf_0
- zlib=1.2.13=h166bdaf_4
- zstd=1.5.2=h3eb15da_6
- pip:
- argparse==1.4.0
- biopython==1.81
- click==8.1.6
- contourpy==1.1.0
- cycler==0.11.0
- cython==3.0.0
- fonttools==4.42.0
- importlib-resources==6.0.0
- kiwisolver==1.4.4
- kneed==0.8.5
- matplotlib==3.7.2
- numpy==1.25.2
- packaging==23.1
- pandas==2.0.3
- patsy==0.5.3
- pillow==10.0.0
- pydamage==0.70
- pyeager==0.1.4.3
- pyparsing==3.0.9
- pysam==0.21.0
- python-dateutil==2.8.2
- pytz==2023.3
- pyyaml==6.0.1
- scipy==1.11.1
- six==1.16.0
- statsmodels==0.14.0
- tqdm==4.65.0
- tzdata==2023.3
- wget==3.2
- zipp==3.16.2
## qjanno is also installed centrally. Not yet on bioconda.