Merge branch 'minor-addons' of https://github.com/biocpy/summarizedex…

…periment into minor-addons
BiocPy · Jan 2, 2025 · ce7b78d · ce7b78d
2 parents 8a66b73 + e13b9ea
commit ce7b78d
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Showing 3 changed files with 5 additions and 6 deletions.
diff --git a/src/summarizedexperiment/RangedSummarizedExperiment.py b/src/summarizedexperiment/RangedSummarizedExperiment.py
@@ -941,7 +941,6 @@ def combine_columns(self, *other) -> "RangedSummarizedExperiment":
         return combine_columns(self, *other)
 
 
-
 ############################
 ######>> combine ops <<#####
 ############################

diff --git a/tests/test_RSE_methods.py b/tests/test_RSE_methods.py
@@ -212,10 +212,10 @@ def test_SE_assay_getters_and_setters():
     new_tse = tse.set_assay("new_counts", assay=np.random.rand(nrows, ncols), in_place=False)
     assert new_tse.get_assay_names() != tse.get_assay_names()
     with pytest.raises(Exception):
-        tse.get_assay("new_counts") 
+        tse.get_assay("new_counts")
     assert new_tse.get_assay("new_counts") is not None
 
     tse.set_assay("new_counts", assay=np.random.rand(nrows, ncols), in_place=True)
     assert new_tse.get_assay_names() == tse.get_assay_names()
-    assert tse.get_assay("new_counts") is not None 
+    assert tse.get_assay("new_counts") is not None
     assert new_tse.get_assay("new_counts") is not None
diff --git a/tests/test_SE_methods.py b/tests/test_SE_methods.py
@@ -3,7 +3,7 @@
 from biocframe import BiocFrame
 import numpy as np
 from summarizedexperiment.SummarizedExperiment import SummarizedExperiment
-import pytest 
+import pytest
 
 __author__ = "jkanche"
 __copyright__ = "jkanche"
@@ -118,10 +118,10 @@ def test_SE_assay_getters_and_setters():
     new_tse = tse.set_assay("new_counts", assay=np.random.rand(nrows, ncols), in_place=False)
     assert new_tse.get_assay_names() != tse.get_assay_names()
     with pytest.raises(Exception):
-        tse.get_assay("new_counts") 
+        tse.get_assay("new_counts")
     assert new_tse.get_assay("new_counts") is not None
 
     tse.set_assay("new_counts", assay=np.random.rand(nrows, ncols), in_place=True)
     assert new_tse.get_assay_names() == tse.get_assay_names()
-    assert tse.get_assay("new_counts") is not None 
+    assert tse.get_assay("new_counts") is not None
     assert new_tse.get_assay("new_counts") is not None