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yhwu committed Aug 7, 2015
1 parent 5500fdc commit b2e279a
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion standardization_based_on_clustering.R
Original file line number Diff line number Diff line change
Expand Up @@ -46,7 +46,7 @@ dereplicateSites <- function(sites){
}

#Dereplicate reads with same standardized starts and provide the longeset width
dereplicatedSites <- unlist(reduce(dereplicatedSites))
dereplicatedSites <- unlist(reduce(dereplicatedSites, min.gapwidth = 0L))
mcols(dereplicatedSites) <- mcols(sites.reduced)

dereplicatedSites
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