Merge pull request #668 from EBISPOT/dev

Remove PECO hardcode

dataload/configs/foundry.json

@@ -7844,17 +7844,17 @@
         "logo": "http://mirrors.creativecommons.org/presskit/buttons/80x15/png/by.png",
         "url": "https://creativecommons.org/licenses/by/4.0/"
       },
-      "ontology_purl": "file:///nfs/production/parkinso/spot/ols4/prod/local_ontologies/peco.owl",
+      "ontology_purl": "http://purl.obolibrary.org/obo/peco.owl",
       "page": "http://browser.planteome.org/amigo/term/PECO:0007359",
       "preferredPrefix": "PECO",
       "products": [
         {
           "id": "peco.owl",
-          "ontology_purl": "file:///nfs/production/parkinso/spot/ols4/prod/local_ontologies/peco.owl"
+          "ontology_purl": "http://purl.obolibrary.org/obo/peco.owl"
         },
         {
           "id": "peco.obo",
-          "ontology_purl": "file:///nfs/production/parkinso/spot/ols4/prod/local_ontologies/peco.obo"
+          "ontology_purl": "http://purl.obolibrary.org/obo/peco.obo"
         }
       ],
       "publications": [

ebi_ontologies.json

@@ -114,51 +114,6 @@
       ],
       "ontology_purl": "file:///nfs/production/parkinso/spot/ols4/prod/local_ontologies/phi.owl"
     },
-    {
-      "activity_status": "active",
-      "contact": {
-        "email": "[email protected]",
-        "github": "jaiswalp",
-        "label": "Pankaj Jaiswal",
-        "orcid": "0000-0002-1005-8383"
-      },
-      "depicted_by": "http://planteome.org/sites/default/files/garland_logo.PNG",
-      "description": "A structured, controlled vocabulary which describes the treatments, growing conditions, and/or study types used in plant biology experiments.",
-      "domain": "investigations",
-      "homepage": "http://planteome.org/",
-      "id": "peco",
-      "layout": "ontology_detail",
-      "license": {
-        "label": "CC BY 4.0",
-        "logo": "http://mirrors.creativecommons.org/presskit/buttons/80x15/png/by.png",
-        "url": "https://creativecommons.org/licenses/by/4.0/"
-      },
-      "ontology_purl": "file:///nfs/production/parkinso/spot/ols4/prod/local_ontologies/peco.owl",
-      "page": "http://browser.planteome.org/amigo/term/PECO:0007359",
-      "preferredPrefix": "PECO",
-      "products": [
-        {
-          "id": "peco.owl",
-          "ontology_purl": "file:///nfs/production/parkinso/spot/ols4/prod/local_ontologies/peco.owl"
-        },
-        {
-          "id": "peco.obo",
-          "ontology_purl": "file:///nfs/production/parkinso/spot/ols4/prod/local_ontologies/peco.obo"
-        }
-      ],
-      "publications": [
-        {
-          "id": "https://www.ncbi.nlm.nih.gov/pubmed/29186578",
-          "title": "The Planteome database: an integrated resource for reference ontologies, plant genomics and phenomics."
-        }
-      ],
-      "repository": "https://github.com/Planteome/plant-experimental-conditions-ontology",
-      "tags": [
-        "experimental conditions"
-      ],
-      "title": "Plant Experimental Conditions Ontology",
-      "tracker": "https://github.com/Planteome/plant-experimental-conditions-ontology/issues"
-    },
     {
       "id": "msio",
       "preferredPrefix": "MSIO",