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conda install correct python version in action
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apriltuesday committed Jun 5, 2024
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3 changes: 2 additions & 1 deletion .github/workflows/variant_remapping.yml
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Expand Up @@ -29,7 +29,8 @@ jobs:
echo "/tmp/nextflow" >> $GITHUB_PATH
cd -
# $CONDA is an environment variable pointing to the root of the miniconda directory
$CONDA/bin/conda update conda
$CONDA/bin/conda update conda # https://github.com/conda/conda/issues/13560
$CONDA/bin/conda install -y python=${{ matrix.python-version }} # https://github.com/actions/setup-python/issues/833
$CONDA/bin/conda env update -q --file conda.yml --name base
$CONDA/bin/conda run pip install -q -r requirements.txt
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