TORNADO - A general purpose parser to produce grammars of single-sequence RNA secondary structure http://rivaslab.org/software/
TORNADO is a general purpose parser to produce grammars of single-sequence RNA secondary structure. TORNADO is written in C, lex and yacc. TORNADO allows to implement a wide range of RNA grammars using a specific language described in the documentation. TORNADO includes most of the inference algorithms usual for single-sequence RNA secondary structure prediction.
Other files to read in the top-level source directory:
INSTALL Brief installation instructions.
documentation/TORNADO_userguide.pdf The tornado User's Guide.
LICENSE copyright and license information
To get started after installation, see the tutorial section in the TORNADO User's Guide (documentation/TORNADO_userguide.pdf).
The tornado development team github.com/EddyRivasLab/RivasLab/tornado