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50 Open 170 Closed
50 Open 170 Closed
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Issues list

The reference group in trend test
#299 opened Dec 16, 2024 by yd-x
Understanding LFC values in pairwise test with structural zeros. Misinterpretation or bug?
#298 opened Dec 9, 2024 by kevinbretscher
Contrast matrices for trend test not square
#296 opened Nov 19, 2024 by microbemarsh
1
structural zeros interpretation
#295 opened Nov 14, 2024 by simone-anza
Possible bug in .iter_remle function
#294 opened Nov 14, 2024 by colinvwood
Improbably huge log-fold change values
#293 opened Oct 31, 2024 by LLansing
NULL results for global, pairwise and pattern analysis
#291 opened Oct 8, 2024 by otaviolovison
Issue with unclassified taxa Inflating DA analysis at specified taxonomic levels in ANCOM-BC2
#289 opened Oct 7, 2024 by aimirza
Different result from ancombc 2.0 and ancombc 2.6 good first issue Good for newcomers
#288 opened Sep 20, 2024 by BangzhuoTongUU
2
Quick question: is pseudo_sens cutoff based on adjusted p-value? help wanted Extra attention is needed
#286 opened Sep 18, 2024 by aimirza
Question about small sample size invalid This doesn't seem right
#284 opened Sep 11, 2024 by UniAlberta
2
R crashes when running random effects on longitudinal data enhancement New feature or request
#283 opened Sep 4, 2024 by maggiemmurphy
Setting fix_formula with variables invalid This doesn't seem right
#281 opened Aug 30, 2024 by UniAlberta
1
Different taxonomy level aggregration and extracting full taxonomic classification. bug Something isn't working
#279 opened Aug 20, 2024 by microb123
Question regarding taxon-specific biases good first issue Good for newcomers
#277 opened Jul 30, 2024 by jorondo1
Dunnett test is more stringent than pairwise test invalid This doesn't seem right
#276 opened Jul 24, 2024 by LLansing
1
ancom model equation invalid This doesn't seem right
#275 opened Jul 24, 2024 by DennisBeest
1
q-values (adjusted p-values) too low for continuous variable enhancement New feature or request
#272 opened Jun 25, 2024 by Pantalius
Error for specific dataset when using rand_formula "contrasts can be applied only to factors with 2 or more levels" help wanted Extra attention is needed
#271 opened Jun 24, 2024 by tybonic
1
Testing interactions: global test using F test with approximate degrees of freedom instead of LRT invalid This doesn't seem right
#270 opened Jun 19, 2024 by giulianonetto
1
object 'passed_ss_age' not found help wanted Extra attention is needed
#269 opened Jun 12, 2024 by JiaLonghao1997
1
NAs and 1s in ancombc2 primary result table help wanted Extra attention is needed
#266 opened May 28, 2024 by lmartinezgili
6
Interpreting error when running ancombc2 function: Error in is.infinite(o1) : default method not implemented for type 'list' help wanted Extra attention is needed
#265 opened May 7, 2024 by 411an13
1
Feature Request: Support for Using Taxa as Explanatory Variables in ANCOMBC2 enhancement New feature or request
#263 opened Apr 19, 2024 by aimirza
global test and pairwise comparisons giving pvals of all NA or all 1 help wanted Extra attention is needed
#262 opened Apr 17, 2024 by jpkarl
3
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