Merge pull request #13 from KWB-R/dev

Release v0.2.0

.Rbuildignore

@@ -9,3 +9,4 @@
 ^.*\.Rproj$
 ^\.Rproj\.user$
 ^index\.md$
+^\.github$

.github/workflows/R-CMD-check.yaml

@@ -0,0 +1,83 @@
+on:
+  push:
+    branches:
+      - master
+      - main
+      - dev
+  pull_request:
+    branches:
+      - master
+      - main
+      - dev
+
+name: R-CMD-check
+
+jobs:
+  R-CMD-check:
+    runs-on: ${{ matrix.config.os }}
+
+    name: ${{ matrix.config.os }} (${{ matrix.config.r }})
+
+    strategy:
+      fail-fast: false
+      matrix:
+        config:
+          - {os: macOS-latest, r: 'release'}
+          - {os: ubuntu-20.04, r: 'release', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"}
+          - {os: windows-latest, r: 'devel'}
+          - {os: windows-latest, r: 'oldrel'}
+          - {os: windows-latest, r: 'release'}
+
+    env:
+      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+      R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
+      RSPM: ${{ matrix.config.rspm }}
+
+    steps:
+      - uses: actions/checkout@v2
+
+      - uses: r-lib/actions/setup-r@v2
+        with:
+          r-version: ${{ matrix.config.r }}
+          use-public-rspm: true
+
+      - uses: r-lib/actions/setup-pandoc@v2
+
+      - name: Query dependencies
+        run: |
+          install.packages('remotes')
+          saveRDS(remotes::dev_package_deps(dependencies = TRUE), "depends.Rds", version = 2)
+        shell: Rscript {0}
+
+      - name: Cache R packages
+        if: runner.os != 'Windows'
+        uses: actions/cache@v1
+        with:
+          path: ${{ env.R_LIBS_USER }}
+          key: ${{ runner.os }}-r-${{ matrix.config.r }}-3-${{ hashFiles('depends.Rds') }}
+          restore-keys: ${{ runner.os }}-r-${{ matrix.config.r }}-3-
+
+      - name: Install system dependencies
+        if: runner.os == 'Linux'
+        env:
+          RHUB_PLATFORM: linux-x86_64-ubuntu-gcc
+        run: |
+          Rscript -e "remotes::install_github('r-hub/sysreqs')"
+          sysreqs=$(Rscript -e "cat(sysreqs::sysreq_commands('DESCRIPTION'))")
+          sudo -s eval "$sysreqs"
+      - name: Install dependencies
+        run: |
+          remotes::install_deps(dependencies = TRUE)
+          remotes::install_cran("rcmdcheck")
+        shell: Rscript {0}
+
+      - name: Check
+        run: rcmdcheck::rcmdcheck(args = "--no-manual", error_on = "warning", check_dir = "check")
+        shell: Rscript {0}
+
+      - name: Upload check results
+        if: failure()
+        uses: actions/upload-artifact@main
+        with:
+          name: ${{ runner.os }}-r${{ matrix.config.r }}-results
+          path: check

.github/workflows/pkgdown.yaml

@@ -0,0 +1,53 @@
+on:
+  push:
+    branches:
+      - main
+      - master
+      - dev
+
+name: pkgdown
+
+jobs:
+  pkgdown:
+    runs-on: windows-latest
+    env:
+      CURL_SSL_BACKEND: "openssl"
+      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+    steps:
+      - uses: actions/checkout@v2
+
+      - uses: r-lib/actions/setup-r@v2
+        with:
+          use-public-rspm: true
+
+      - uses: r-lib/actions/setup-pandoc@v2
+
+      - name: Query dependencies
+        run: |
+          install.packages('remotes')
+          saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2)
+          writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version")
+        shell: Rscript {0}
+
+      - name: Cache R packages
+        uses: actions/cache@v2
+        with:
+          path: ${{ env.R_LIBS_USER }}
+          key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
+          restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-
+
+      - name: Install dependencies
+        run: |
+          remotes::install_deps(dependencies = TRUE)
+          install.packages("pkgdown", type = "binary")
+        shell: Rscript {0}
+
+      - name: Install package
+        run: R CMD INSTALL .
+        shell: cmd
+
+      - name: Deploy package
+        run: |
+          git config --local user.email "[email protected]"
+          git config --local user.name "GitHub Actions"
+          Rscript -e 'pkgdown::deploy_to_branch(new_process = FALSE)'

.github/workflows/pr-commands.yaml

@@ -0,0 +1,51 @@
+on:
+  issue_comment:
+    types: [created]
+name: Commands
+jobs:
+  document:
+    if: startsWith(github.event.comment.body, '/document')
+    name: document
+    runs-on: macOS-latest
+    env:
+      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+    steps:
+      - uses: actions/checkout@v2
+      - uses: r-lib/actions/pr-fetch@master
+        with:
+          repo-token: ${{ secrets.GITHUB_TOKEN }}
+      - uses: r-lib/actions/setup-r@master
+      - name: Install dependencies
+        run: Rscript -e 'install.packages(c("remotes", "roxygen2"))' -e 'remotes::install_deps(dependencies = TRUE)'
+      - name: Document
+        run: Rscript -e 'roxygen2::roxygenise()'
+      - name: commit
+        run: |
+          git add man/\* NAMESPACE
+          git commit -m 'Document'
+      - uses: r-lib/actions/pr-push@master
+        with:
+          repo-token: ${{ secrets.GITHUB_TOKEN }}
+  style:
+    if: startsWith(github.event.comment.body, '/style')
+    name: style
+    runs-on: macOS-latest
+    env:
+      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+    steps:
+      - uses: actions/checkout@v2
+      - uses: r-lib/actions/pr-fetch@master
+        with:
+          repo-token: ${{ secrets.GITHUB_TOKEN }}
+      - uses: r-lib/actions/setup-r@master
+      - name: Install dependencies
+        run: Rscript -e 'install.packages("styler")'
+      - name: Style
+        run: Rscript -e 'styler::style_pkg()'
+      - name: commit
+        run: |
+          git add \*.R
+          git commit -m 'Style'
+      - uses: r-lib/actions/pr-push@master
+        with:
+          repo-token: ${{ secrets.GITHUB_TOKEN }}

.github/workflows/test-coverage.yaml

@@ -0,0 +1,48 @@
+on:
+  push:
+    branches:
+      - master
+      - main
+  pull_request:
+    branches:
+      - master
+      - main
+
+name: test-coverage
+
+jobs:
+  test-coverage:
+    runs-on: windows-latest
+    env:
+      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+    steps:
+      - uses: actions/checkout@v2
+
+      - uses: r-lib/actions/setup-r@v2
+
+      - uses: r-lib/actions/setup-pandoc@v2
+
+      - name: Query dependencies
+        run: |
+          install.packages('remotes')
+          saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2)
+          writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version")
+        shell: Rscript {0}
+
+      - name: Cache R packages
+        uses: actions/cache@v1
+        with:
+          path: ${{ env.R_LIBS_USER }}
+          key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
+          restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-
+
+      - name: Install dependencies
+        run: |
+          install.packages(c("remotes"))
+          remotes::install_deps(dependencies = TRUE)
+          remotes::install_cran("covr")
+        shell: Rscript {0}
+
+      - name: Test coverage
+        run: covr::codecov()
+        shell: Rscript {0}

DESCRIPTION

@@ -1,42 +1,39 @@
-Package: kwb.umberto
-Title: R package supporting UMERTO LCA at KWB
-Version: 0.1.0
-Authors@R: 
-    c(person(given = "Michael",
-             family = "Rustler",
-             role = c("aut", "cre"),
-             email = "[email protected]",
-             comment = c(ORCID = "0000-0003-0647-7726")),
-      person(given = "Hauke",
-             family = "Sonnenberg",
-             role = "ctb",
-             email = "[email protected]",
-             comment = c(ORCID = "0000-0001-9134-2871")),
-      person(given = "Kompetenzzentrum Wasser Berlin gGmbH (KWB)",
-             role = "cph"))
-Description: Helper functions for data import, aggregation and
-    visualisation of UMBERTO (https://www.ifu.com/umberto/) model output.
-License: MIT + file LICENSE
-URL: https://github.com/KWB-R/kwb.umberto
-BugReports: https://github.com/KWB-R/kwb.umberto/issues
-Imports: 
-    data.table,
-    dplyr,
-    ggforce,
-    ggplot2,
-    janitor,
-    magrittr,
-    openxlsx,
-    readr,
-    tidyr
-Suggests: 
-    covr,
-    knitr,
-    rmarkdown,
-    testthat
-VignetteBuilder: 
-    knitr
-ByteCompile: true
-Encoding: UTF-8
-LazyData: true
-RoxygenNote: 6.1.1
+Package: kwb.umberto
+Title: R package supporting UMERTO LCA at KWB
+Version: 0.2.0
+Authors@R: c(
+    person("Michael", "Rustler", , "[email protected]", role = c("aut", "cre"),
+           comment = c(ORCID = "0000-0003-0647-7726")),
+    person("Hauke", "Sonnenberg", , "[email protected]", role = "ctb",
+           comment = c(ORCID = "0000-0001-9134-2871")),
+    person("FAKIN", role = "fnd"),
+    person("Kompetenzzentrum Wasser Berlin gGmbH (KWB)", role = "cph")
+  )
+Description: Helper functions for data import, aggregation and
+    visualisation of UMBERTO (https://www.ifu.com/umberto/) model output.
+License: MIT + file LICENSE
+URL: https://github.com/KWB-R/kwb.umberto
+BugReports: https://github.com/KWB-R/kwb.umberto/issues
+Imports: 
+    data.table,
+    dplyr,
+    ggforce,
+    ggplot2,
+    janitor,
+    magrittr,
+    openxlsx,
+    readr,
+    tidyr,
+    tidyselect
+Suggests: 
+    covr,
+    knitr,
+    rmarkdown,
+    testthat (>= 3.0.0)
+VignetteBuilder: 
+    knitr
+ByteCompile: true
+Encoding: UTF-8
+LazyData: true
+RoxygenNote: 7.2.2
+Config/testthat/edition: 3

LICENSE

@@ -1,6 +1,6 @@
 # MIT License
 
-Copyright (c) 2017-2020 Kompetenzzentrum Wasser Berlin gGmbH (KWB)
+Copyright (c) 2017-2022 Kompetenzzentrum Wasser Berlin gGmbH (KWB)
 
 Permission is hereby granted, free of charge, to any person obtaining a copy
 of this software and associated documentation files (the "Software"), to deal

LICENSE.md

@@ -1,6 +1,6 @@
 # MIT License
 
-Copyright (c) 2017-2020 Kompetenzzentrum Wasser Berlin gGmbH (KWB)
+Copyright (c) 2017-2022 Kompetenzzentrum Wasser Berlin gGmbH (KWB)
 
 Permission is hereby granted, free of charge, to any person obtaining a copy
 of this software and associated documentation files (the "Software"), to deal