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Add option to use non-surface density in MLD_003
A new parameter is added to diagnoseMLDbyDensityDifference that allows a user to specify a reference for the surface density that is not the top model layer. This feature should make the MLD_003 diagnostic more consistent with the de Boyer Montégut MLD climatology. In addition, new diagnostics have been added to save the actual depth of the density used and the "surface" density used in the MLD calculation. These options have only been added for the MLD_003 option.
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