BINF.6210_Assignment2

Assignment 2 in "Software Tools in Bioinformatics" at the University of Guelph

Attributions

1. primary script by Noah Zeidenberg
2. major edits by Sameh Mohamed include:
   • function for performing quality checks, data cleaning and filtering
   • function for calculating kmer frequency
   • density plot of the probabilities of 1-, 2-, and 3-mer frequencies
3. minor edits include:
   • formatting fixes
   • filtering out large sequences (treated as outliers)