feat: add resolution 0.1 to non-cite workflow

OpenOmics · Jan 16, 2025 · db7af51 · db7af51
1 parent 38d496b
commit db7af51
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/workflow/scripts/seuratSampleQC.R b/workflow/scripts/seuratSampleQC.R
@@ -201,7 +201,7 @@ seur <- RunUMAP(seur, reduction = 'pca', dims = 1:30, assay = 'RNA')
 
 coord <- Embeddings(seur, reduction='pca')[,1:30]
 d <- dist(coord, method="euclidean")
-for(resolution in c(seq(0.2,1.0,0.2), 1.5, 2.0)){
+for(resolution in c(0.1, seq(0.2,1.0,0.2), 1.5, 2.0)){
   seur <- FindClusters(seur, resolution = resolution)
 
   #Calculate silhouette scores and generate plots