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Cervical cancer #1287

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Cervical cancer #1287

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andrew-phillips-1
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Here's a first draft of this module. I need to do another search to try to find additional data for calibration.

I couldn't upload the draft write as it was asking me to use the command line and Git LFS.

@mnjowe
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mnjowe commented Jan 16, 2025

Hi @andrew-phillips-1 , @mmsuarezcosta and @thewati. Apart from the below files. Do you also want to make changes to any other file(s) in this PR?

cervical_cancer.py
cervical_cancer_analyses.py
test_cervical_cancer.py
ResourceFile_Cervical_Cancer.xlsx

@andrew-phillips-1
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Not from my side thanks Emmanuel

@thewati
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thewati commented Jan 16, 2025

Hi @andrew-phillips-1 , @mmsuarezcosta and @thewati. Apart from the below files. Do you also want to make changes to any other file(s) in this PR?

cervical_cancer.py
cervical_cancer_analyses.py
test_cervical_cancer.py
ResourceFile_Cervical_Cancer.xlsx

@mnjowe I think cancer_consumables.py might have gone through some changes too if I remember correctly

@mnjowe
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mnjowe commented Jan 16, 2025

Thanks Andrew and Wati. Let's wait to hear from @mmsuarezcosta if there are any more files before we start cleaning the PR and resolve any other conflicts.

@mmsuarezcosta
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@mnjowe I went through all the changed files in the PR to check, and I am confirming that these this list mentioned is correct. Thanks @thewati for the catch regarding the consumables.

cervical_cancer.py
cervical_cancer_analyses.py
test_cervical_cancer.py
ResourceFile_Cervical_Cancer.xlsx
cancer_consumables.py

@mnjowe
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mnjowe commented Jan 17, 2025

Great @mmsuarezcosta! You may schedule a call then, I have time today

# Conflicts:
#	resources/ResourceFile_HIV.xlsx
#	resources/ResourceFile_RTI.xlsx
#	resources/ResourceFile_TB.xlsx
#	resources/healthsystem/human_resources/scaling_capabilities/ResourceFile_HR_scaling_by_level_and_officer_type.xlsx
#	resources/healthsystem/priority_policies/ResourceFile_PriorityRanking_ALLPOLICIES.xlsx
#	resources/malaria/ResourceFile_malaria.xlsx
#	src/scripts/malaria/analysis_malaria.py
#	src/tlo/analysis/utils.py
#	src/tlo/methods/enhanced_lifestyle.py
#	src/tlo/methods/healthsystem.py
#	src/tlo/methods/hiv.py
#	src/tlo/methods/hsi_event.py
#	src/tlo/methods/malaria.py
#	src/tlo/methods/tb.py
#	tests/test_htm_scaleup.py
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6 participants