[#7674] Add support for AWS batch retry limit #614
Workflow file for this run
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| name: chart-update-on-merge | |
| on: | |
| pull_request: | |
| types: | |
| - closed | |
| jobs: | |
| chart-update: | |
| name: Cromwell Version Auto Updater | |
| if: github.event.pull_request.merged == true | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Clone Cromwell | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: broadinstitute/cromwell | |
| token: ${{ secrets.BROADBOT_GITHUB_TOKEN }} # Has to be set at checkout AND later when pushing to work | |
| path: cromwell | |
| - id: get-jira-id | |
| # We're cloning multiple repos, so Cromwell and its actions are at `./cromwell/` instead of `./` | |
| uses: ./cromwell/.github/library/get_jira_id | |
| - uses: actions/setup-java@v4 | |
| with: | |
| distribution: 'temurin' | |
| java-version: '17' | |
| - name: (DISABLED) Clone Cromwhelm | |
| # WX-1837 disabling CI for this chart, used by AoU RWB only | |
| if: false | |
| uses: actions/checkout@v2 | |
| with: | |
| repository: broadinstitute/cromwhelm | |
| token: ${{ secrets.BROADBOT_GITHUB_TOKEN }} # Has to be set at checkout AND later when pushing to work | |
| path: cromwhelm | |
| - name: Find Cromwell short SHA | |
| run: | | |
| set -e | |
| cd cromwell | |
| echo "CROMWELL_SHORT_SHA=`git rev-parse --short $GITHUB_SHA`" >> $GITHUB_ENV | |
| - name: Find Cromwell release number | |
| run: | | |
| set -e | |
| previous_version=$(curl -X GET https://api.github.com/repos/broadinstitute/cromwell/releases/latest | jq .tag_name | xargs) | |
| if ! [[ "${previous_version}" =~ ^[0-9][0-9]+$ ]]; then | |
| exit 1 | |
| fi | |
| echo "CROMWELL_NUMBER=$((previous_version + 1))" >> $GITHUB_ENV | |
| - name: Save complete image ID | |
| run: | | |
| echo "CROMWELL_VERSION=`echo "$CROMWELL_NUMBER-$CROMWELL_SHORT_SHA"`" >> $GITHUB_ENV | |
| # `DSDEJENKINS_PASSWORD` auto syncs from vault with https://github.com/broadinstitute/terraform-ap-deployments/pull/614 | |
| - name: Login to Docker Hub | |
| uses: docker/login-action@v1 | |
| with: | |
| username: dsdejenkins | |
| password: ${{ secrets.DSDEJENKINS_PASSWORD }} | |
| # Build & push `cromwell`, `womtool`, `cromiam`, and `cromwell-drs-localizer` | |
| # This step is validated in the GHA 'docker_build_test.yml' without the accompanying docker push | |
| - name: Build Cromwell Docker | |
| run: | | |
| set -e | |
| cd cromwell | |
| sbt -Dproject.isSnapshot=false dockerBuildAndPush | |
| - name: Deploy to dev and board release train (Cromwell) | |
| uses: broadinstitute/repository-dispatch@master | |
| with: | |
| token: ${{ secrets.BROADBOT_GITHUB_TOKEN }} | |
| repository: broadinstitute/terra-helmfile | |
| event-type: update-service | |
| client-payload: '{"service": "cromwell", "version": "${{ env.CROMWELL_VERSION }}", "dev_only": false}' | |
| - name: Deploy to dev and board release train (CromIAM) | |
| uses: broadinstitute/repository-dispatch@master | |
| with: | |
| token: ${{ secrets.BROADBOT_GITHUB_TOKEN }} | |
| repository: broadinstitute/terra-helmfile | |
| event-type: update-service | |
| client-payload: '{"service": "cromiam", "version": "${{ env.CROMWELL_VERSION }}", "dev_only": false}' | |
| - name: (DISABLED) Edit & push cromwhelm chart | |
| # WX-1837 disabling CI for this chart, used by AoU RWB only | |
| if: false | |
| env: | |
| BROADBOT_GITHUB_TOKEN: ${{ secrets.BROADBOT_GITHUB_TOKEN }} | |
| run: | | |
| set -e | |
| cd cromwhelm | |
| git checkout main | |
| ls -la | |
| sed -i "s|image: broadinstitute/cromwell:.*|image: broadinstitute/cromwell:$CROMWELL_VERSION|" terra-batch-libchart/values.yaml | |
| git diff | |
| git config --global user.name "broadbot" | |
| git config --global user.email "[email protected]" | |
| git commit -am "${{ steps.get-jira-id.outputs.jira-id }}: Auto update to Cromwell $CROMWELL_VERSION" | |
| git push https://broadbot:[email protected]/broadinstitute/cromwhelm.git main | |
| cd - | |
| ### WX-1836 Steps below here are disabled Azure CI | |
| - name: (DISABLED) Clone terra-helmfile | |
| uses: actions/checkout@v3 | |
| if: false | |
| with: | |
| repository: broadinstitute/terra-helmfile | |
| token: ${{ secrets.BROADBOT_GITHUB_TOKEN }} # Has to be set at checkout AND later when pushing to work | |
| path: terra-helmfile | |
| - name: (DISABLED) Update workflows-app in terra-helmfile | |
| if: false | |
| run: | | |
| set -e | |
| cd terra-helmfile | |
| sed -i "s|image: broadinstitute/cromwell:.*|image: broadinstitute/cromwell:$CROMWELL_VERSION|" charts/workflows-app/values.yaml | |
| cd - | |
| - name: (DISABLED) Update cromwell-runner-app in terra-helmfile | |
| if: false | |
| run: | | |
| set -e | |
| cd terra-helmfile | |
| sed -i "s|image: broadinstitute/cromwell:.*|image: broadinstitute/cromwell:$CROMWELL_VERSION|" charts/cromwell-runner-app/values.yaml | |
| cd - | |
| - name: (DISABLED) Make PR in terra-helmfile | |
| if: false | |
| env: | |
| BROADBOT_TOKEN: ${{ secrets.BROADBOT_GITHUB_TOKEN }} | |
| GH_TOKEN: ${{ secrets.BROADBOT_GITHUB_TOKEN }} | |
| run: | | |
| set -e | |
| JIRA_ID=${{ steps.get-jira-id.outputs.jira-id }} | |
| if [[ $JIRA_ID == "missing" ]]; then | |
| echo "JIRA_ID missing, PR to terra-helmfile will not be created" | |
| exit 0; | |
| fi | |
| cd terra-helmfile | |
| git checkout -b ${JIRA_ID}-cromwell-update-$CROMWELL_VERSION | |
| git config --global user.name "broadbot" | |
| git config --global user.email "[email protected]" | |
| git commit -am "${JIRA_ID}: Auto update Cromwell to $CROMWELL_VERSION in workflows-app and cromwell-runner-app" | |
| git push -u origin ${JIRA_ID}-cromwell-update-$CROMWELL_VERSION | |
| gh pr create --title "${JIRA_ID}: auto update Cromwell version to $CROMWELL_VERSION in workflows-app and cromwell-runner-app" --body "${JIRA_ID} helm chart update" --label "automerge" | |
| cd - |