Code

WX-1307 Azure E2E test#7239

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jgainerdewar merged 84 commits intodevelopbroadinstitute/cromwell:developfrom WX-1307-portbroadinstitute/cromwell:WX-1307-portCopy head branch name to clipboardOct 26, 2023

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Commits

Commits on Aug 14, 2023

• WX-983 initial skeleton of workflow, checking if test call works and that env variables flow in correctly

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• WX-983 fully commented out github context action

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• WX-983 updated branch ref to point to testing/ticket branch

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• WX-983 swapping workflow_dispatch for push just to test workflow skeleton

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Commits on Aug 22, 2023

• WX-983 additional workflow updates

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Commits on Aug 28, 2023

• WX-983 added basic e2e script, updated workflow script, need to test

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• WX-983 adjusted print statement

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• WX-983 added branches attribute to workflow file

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• WX-983 removed old comments, added push attribute

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• WX-983 added needs attribute to create-bee step, input reference update

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Commits on Aug 29, 2023

• WX-983 removed push attribute, changed needs and if conditions on some steps

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• WX-983 syntax corrections, removed invalid branches attribute

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• WX-983 updates to env and action input variables

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• WX-983 masked echoed token, step rearrangement, gitignore update

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Commits on Sep 6, 2023

• WX-983 adjustments to variable assignment, sleep calls in workflow and test

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Commits on Sep 11, 2023

• WX-983 minor updates

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• WX-983 ref updates, use dev for bee template testing

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Commits on Sep 12, 2023

• WX-983 json correction, env variable renaming, still debugging workflow

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• WX-983 added if conditional to attach step to check on access_token

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• WX-983 updated workflow to match new expectations from terra-github-workflows actions, moved OAuth token generation to e2e test job

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Commits on Sep 15, 2023

• WX-983 adding always() condition to see if cleanup jobs still run on test failure

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• WX-983 going to just use always() just to test if condition

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• WX-983 added missing comma

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Commits on Sep 18, 2023

• WX-983 path correction on workflow

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Commits on Sep 20, 2023

• WX-983 workflow updates, test script corrections

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Commits on Oct 3, 2023

• WX-1306 workflow submission working against static workspace, need to get workflow fetch running

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• WX-1306 submission and retrieval working, however workflow is failing (need to figure out why)

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• WX-1306 script now runs basic workflow successfully

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• WX-1306 added notes on commented out code

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• WX-1306 grouped env variables together

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• WX-1306 additional comments

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• WX-1306 restored hello.inputs, removed hello.options

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Commits on Oct 4, 2023

• WX-1307 uncommented out provisioning function calls, added workflow comments, ready to test GHA

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Commits on Oct 5, 2023

• WX-1307 added additional methods to handle workspace cleanup

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Commits on Oct 6, 2023

• WX-1307 adjustements to workflow status conditionals

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• WX-1307 updated workflow to use target-branch instead of hardcoded value

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• WX-1307 defined workflow_id outside of try block, added comments to GH workflow

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• WX-1307 adding print statements to debug

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• WX-1307 confirmed workflow submission erroring, moving print statements for more debugging

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• WX-1307 added missing 'Bearer' in Authorization header

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Commits on Oct 10, 2023

• WX-1307 using with to handle opening files, variables for sleep_timers, more debugging

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• WX-1307 print exception rather than re-raising for better logs

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• WX-1307 trimmed white spaces and newlines from inputs, output exception on new line

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• WX-1307 added exit code to trigger failure on GHA job report

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Commits on Oct 11, 2023

• WX-1307 attempt to delete workspace with rawls v2 endpoint, added sleep timer for workflow status checks

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• WX-1307 added debugging statements and deletion polling logic, gha workflow adjustment

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Commits on Oct 12, 2023

• WX-1307 swapped out List for deque

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• WX-1307 removed debug print statements

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• WX-1307 removed old comments, added more logging statements for workspace deletion

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• WX-1307 added exception handling to seperate workflow submission from workspace cleanup

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• WX-1307 pass in max_retry value in method call

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• WX-1307 typo correction, added response logging for initial DELETE response

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• WX-1307 corrected casing on appendleft method call

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Commits on Oct 13, 2023

• WX-1307 increased retry count for workspace deletion, outputting init delete response

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• WX-1307 changed logging in workspace provisioning method

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• WX-1307 removed extra response output

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• WX-1307 correction to failed cleanup message

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• Merge branch 'develop' into WX-1307

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Commits on Oct 16, 2023

• Merge branch 'develop' into WX-1307

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• WX-1307 added schedule to workflow (with variable adjustments since scheduled jobs can't take inputs)

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• WX-1307 corrected copy-paste error with init param assignments

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• WX-1307 removed unused files, PR feedback

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• WX-1307 switched contact email to broadinstitute

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Commits on Oct 17, 2023

• WX-1307-port updated repo to use test workflow in dsp-reusable-workflows

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Commits on Oct 20, 2023

• Generate auth token in child workflow

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• Temporarily keep BEE

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• Temporarily use existing BEE

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• Different way to set ref

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  e1e0c2f

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• Try direct dispatch

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• Fix

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• Hardcode branch for now

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Commits on Oct 22, 2023

• Roll toward final BEE handling

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• Return to normal BEE handling

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• Remove migrated Python script

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• Fix BEE name

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Commits on Oct 23, 2023

• Rename github workflow

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• Revert rename for testing

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• Alert on Slack

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Commits on Oct 25, 2023

• Clean up inputs

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Commits on Oct 26, 2023

• Undo hard-coded branch

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• Parameterize dsp-reusable-workflows branch

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• Don't do that

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• Remove obsolete comment

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• Rename e2e test file

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