fix: step 4 cleanups

brown-ccv · Jan 16, 2024 · e96c943 · e96c943
1 parent 4c486d1
commit e96c943
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Showing 3 changed files with 10 additions and 47 deletions.
diff --git a/src/icesat2_tracks/analysis_db/A02c_IOWAGA_thredds_prior.py b/src/icesat2_tracks/analysis_db/A02c_IOWAGA_thredds_prior.py
@@ -1,4 +1,4 @@
-import os, sys
+import sys
 
 from icesat2_tracks.config.IceSAT2_startup import (
     mconfig,
@@ -425,8 +425,6 @@ def test_nan_frac(imask):
 except:
     target_name = "A02_" + track_name + "_hindcast_fail"
 
-
-# %%
 def plot_prior(Prior, axx):
     angle = Prior["incident_angle"][
         "value"

diff --git a/src/icesat2_tracks/analysis_db/B03_plot_spectra_ov.py b/src/icesat2_tracks/analysis_db/B03_plot_spectra_ov.py
@@ -25,15 +25,15 @@
 
 
 track_name, batch_key, test_flag = io.init_from_input(
-    sys.argv
+    sys.argv # TODO: Handle via CLI
 )  # loads standard experiment
 hemis, batch = batch_key.split("_")
 
 load_path = mconfig["paths"]["work"] + batch_key + "/B02_spectra/"
-load_file = load_path + "B02_" + track_name  # + '.nc'
+load_file = load_path + "B02_" + track_name
 plot_path = (
     mconfig["paths"]["plot"] + "/" + hemis + "/" + batch_key + "/" + track_name + "/"
-)
+) # TODO: Update with pathlib
 MT.mkdirs_r(plot_path)
 
 Gk = xr.open_dataset(load_file + "_gFT_k.nc")

diff --git a/src/icesat2_tracks/config/IceSAT2_startup.py b/src/icesat2_tracks/config/IceSAT2_startup.py
@@ -1,27 +1,10 @@
 import os
 import pathlib
-###
-#   THIS FILE IS A LOCAL FILE
-#   it is not maintained via git, it contains configs specific to the machine
-###
-
-#os.environ["DISPLAY"] = "localhost:10.0"
-# 14, 16,  work
-#standart libraries:
-import numpy as np
-import matplotlib
 import matplotlib.pyplot as plt
-
-import matplotlib.colors as colors
-import pandas as pd
 from icesat2_tracks.local_modules import m_colormanager_ph3 as M_color
 from icesat2_tracks.local_modules import m_tools_ph3 as MT
-from icesat2_tracks.local_modules import m_general_ph3 as M
-
 import string
 
-import xarray as xr
-
 ## Read folders and configuration paths
 config_dir_path = os.path.dirname(__file__)
 mconfig=MT.json_load('config',config_dir_path)
@@ -37,12 +20,10 @@
 #load colorscheme
 color_schemes=M_color.color(path=mconfig['paths']['config'], name='color_def')
 
-
 lstrings =iter([i+') ' for i in list(string.ascii_lowercase)])
 # define journal fig sizes
 fig_sizes = mconfig['fig_sizes']['AMS']
 
-
 SMALL_SIZE = 8
 MEDIUM_SIZE = 10
 BIGGER_SIZE = 12
@@ -52,11 +33,11 @@
 plt.rc('font', size=SMALL_SIZE, serif='Helvetica Neue', weight='normal')          # controls default text sizes
 plt.rc('text', usetex='false')
 plt.rc('axes', titlesize=MEDIUM_SIZE, labelweight='normal')     # fontsize of the axes title
-plt.rc('axes', labelsize=SMALL_SIZE, labelweight='normal') #, family='bold')    # fontsize of the x and y labels
+plt.rc('axes', labelsize=SMALL_SIZE, labelweight='normal') # fontsize of the x and y labels
 plt.rc('xtick', labelsize=SMALL_SIZE)    # fontsize of the tick labels
 plt.rc('ytick', labelsize=SMALL_SIZE)    # fontsize of the tick labels
 plt.rc('legend', fontsize=SMALL_SIZE, frameon=False)    # legend fontsize
-plt.rc('figure', titlesize=MEDIUM_SIZE, titleweight='bold', autolayout=True) #, family='bold')  # fontsize of the figure title
+plt.rc('figure', titlesize=MEDIUM_SIZE, titleweight='bold', autolayout=True) # fontsize of the figure title
 plt.rc('path', simplify=True)
 plt.rcParams['figure.figsize'] = (10, 8)
 plt.rcParams['pcolor.shading'] = 'auto'
@@ -66,15 +47,7 @@
 plt.rc('axes', labelsize= MEDIUM_SIZE, labelweight='normal')
 plt.rc('axes.spines', top= False, right=False )
 
-
-
-def font_for_print():
-
-    SMALL_SIZE = 6
-    MEDIUM_SIZE = 8
-    BIGGER_SIZE = 10 # not used. CP
-    legend_properties = {'weight':'bold'} # not used. CP
-
+def font_for_print(SMALL_SIZE = 6, MEDIUM_SIZE = 8):
     plt.rc('font', size=SMALL_SIZE, serif='Helvetica Neue', weight='normal')          # controls default text sizes
     plt.rc('text', usetex='false')
     plt.rc('axes', titlesize=MEDIUM_SIZE, labelweight='normal')     # fontsize of the axes title
@@ -85,21 +58,13 @@ def font_for_print():
     plt.rc('figure', titlesize=MEDIUM_SIZE, titleweight='bold', autolayout=True) #, family='bold')  # fontsize of the figure title
     plt.rc('axes', labelsize= SMALL_SIZE, labelweight='normal')
 
-def font_for_pres():
-
-    SMALL_SIZE = 10
-    MEDIUM_SIZE = 12
-    BIGGER_SIZE = 14 # not used. CP
-    legend_properties = {'weight':'bold'} # not used. CP
-
-
-    plt.rc('font', size=SMALL_SIZE, serif='Helvetica Neue', weight='normal')          # controls default text sizes
+def font_for_pres(SMALL_SIZE = 10, MEDIUM_SIZE = 12):
+    plt.rc('font', size=SMALL_SIZE, serif='Helvetica Neue', weight='normal') # controls default text sizes
     plt.rc('text', usetex='false')
     plt.rc('axes', titlesize=MEDIUM_SIZE, labelweight='normal')     # fontsize of the axes title
     plt.rc('axes', labelsize=SMALL_SIZE, labelweight='normal') #, family='bold')    # fontsize of the x and y labels
     plt.rc('xtick', labelsize=SMALL_SIZE)    # fontsize of the tick labels
     plt.rc('ytick', labelsize=SMALL_SIZE)    # fontsize of the tick labels
     plt.rc('legend', fontsize=SMALL_SIZE, frameon=False)    # legend fontsize
-    plt.rc('figure', titlesize=MEDIUM_SIZE, titleweight='bold', autolayout=True) #, family='bold')  # fontsize of the figure title
-
+    plt.rc('figure', titlesize=MEDIUM_SIZE, titleweight='bold', autolayout=True) # fontsize of the figure title
     plt.rc('axes', labelsize= SMALL_SIZE, labelweight='normal')