Merge branch 'fix_readme_shibo' into 'main'

add pymol link to PyMOLfold See merge request molecule/protenix!50
bytedance · Dec 26, 2024 · d4040ef · d4040ef
2 parents 167528c + f5578d3
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diff --git a/README.md b/README.md
@@ -78,6 +78,9 @@ protenix msa --input examples/example_without_msa.json --out_dir ./output
 protenix msa --input examples/prot.fasta --out_dir ./output
 ```
 
+### Run with PyMol
+
+If you want to run Protenix inference with `PyMol`, please refer to [PyMOLfold](https://github.com/colbyford/PyMOLfold).
 
 ## Training
 If you're interested in model training, see [<u> training documentation </u>](docs/training.md).

diff --git a/setup.py b/setup.py
@@ -20,7 +20,7 @@
 setup(
     name="protenix",
     python_requires=">=3.10",
-    version="0.3.4",
+    version="0.3.5",
     description="A trainable PyTorch reproduction of AlphaFold 3.",
     author="Bytedance Inc.",
     url="https://github.com/bytedance/Protenix",