Merge pull request #219 from ddsjoberg/217-CRAN_violation

217 Update wit no installation of packages in vignette
ddsjoberg · Aug 20, 2019 · 6cf8c52 · 6cf8c52
2 parents e0829d8 + 9e37081
commit 6cf8c52
Show file tree

Hide file tree

Showing 73 changed files with 489 additions and 876 deletions.
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,7 +1,7 @@
 Package: gtsummary
 Title: Presentation-Ready Data Summary and Analytic Result
     Tables
-Version: 1.2.0.9001
+Version: 1.2.1
 Authors@R: 
     c(person(given = "Daniel D.",
              family = "Sjoberg",

diff --git a/NEWS.md b/NEWS.md
@@ -1,4 +1,6 @@
-# gtsummary (development version)
+# gtsummary 1.2.1
+
+* Vignettes install the {gt} package to a temporary directory (required for CRAN check) (#217)
 
 * Added ability to name custom `add_p()` tests (#213)
 

diff --git a/R/add_p.R b/R/add_p.R
@@ -48,8 +48,10 @@
 #'   tbl_summary(by = trt) %>%
 #'   add_p()
 #'
+#' \donttest{
 #' # Conduct a custom McNemar test for response,
-#' # Function must return a named list(p = ?, test = ?)
+#' # Function must return a named list(p = 0.05, test = "McNemar's test")
+#' # Function names begins with 'add_p_test.' and ends with the alias
 #' add_p_test.mcnemar <- function(data, variable, by, ...) {
 #'   result <- list()
 #'   result$p <- stats::mcnemar.test(data[[variable]], data[[by]])$p.value
@@ -61,7 +63,7 @@
 #'   trial[c("response", "trt")] %>%
 #'   tbl_summary(by = trt) %>%
 #'   add_p(test = vars(response) ~ "mcnemar")
-#'
+#' }
 #' @section Example Output:
 #' \if{html}{Example 1}
 #'

diff --git a/codemeta.json b/codemeta.json
@@ -10,7 +10,7 @@
   "codeRepository": "http://www.danieldsjoberg.com/gtsummary/",
   "issueTracker": "https://github.com/ddsjoberg/gtsummary/issues",
   "license": "https://spdx.org/licenses/MIT",
-  "version": "1.2.0.9001",
+  "version": "1.2.1",
   "programmingLanguage": {
     "@type": "ComputerLanguage",
     "name": "R",
@@ -431,7 +431,7 @@
   ],
   "releaseNotes": "https://github.com/ddsjoberg/gtsummary/blob/master/NEWS.md",
   "readme": "https://github.com/ddsjoberg/gtsummary/blob/master/README.md",
-  "fileSize": "1356.718KB",
+  "fileSize": "1357.021KB",
   "contIntegration": [
     "https://travis-ci.org/ddsjoberg/gtsummary",
     "https://ci.appveyor.com/project/ddsjoberg/gtsummary",

diff --git a/cran-comments.md b/cran-comments.md
diff --git a/docs/CODE_OF_CONDUCT.html b/docs/CODE_OF_CONDUCT.html
diff --git a/docs/CONTRIBUTING.html b/docs/CONTRIBUTING.html
diff --git a/docs/ISSUE_TEMPLATE.html b/docs/ISSUE_TEMPLATE.html
diff --git a/docs/LICENSE-text.html b/docs/LICENSE-text.html
diff --git a/docs/LICENSE.html b/docs/LICENSE.html
diff --git a/docs/SUPPORT.html b/docs/SUPPORT.html
diff --git a/docs/articles/index.html b/docs/articles/index.html