R-CMD-check #592
Annotations
27 warnings
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Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v1. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/
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Set up R and install BiocManager
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
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Run BiocCheck
unable to access index for repository https://www.bioconductor.org/packages/3.21/data/annotation/bin/macosx/big-sur-arm64/contrib/4.5:
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Run BiocCheck
unable to access index for repository https://www.bioconductor.org/packages/3.21/workflows/bin/macosx/big-sur-arm64/contrib/4.5:
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Run BiocCheck
unable to access index for repository https://www.bioconductor.org/packages/3.21/books/bin/macosx/big-sur-arm64/contrib/4.5:
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Run BiocCheck
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
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Run BiocCheck
unable to access index for repository https://www.bioconductor.org/packages/3.21/data/annotation/bin/macosx/big-sur-arm64/contrib/4.5:
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Run BiocCheck
unable to access index for repository https://www.bioconductor.org/packages/3.21/workflows/bin/macosx/big-sur-arm64/contrib/4.5:
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Run BiocCheck
unable to access index for repository https://www.bioconductor.org/packages/3.21/books/bin/macosx/big-sur-arm64/contrib/4.5:
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Run BiocCheck
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
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The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Install dependencies
unable to access index for repository https://www.bioconductor.org/packages/3.21/data/annotation/bin/macosx/big-sur-arm64/contrib/4.5:
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Install dependencies
unable to access index for repository https://www.bioconductor.org/packages/3.21/workflows/bin/macosx/big-sur-arm64/contrib/4.5:
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Install dependencies
unable to access index for repository https://www.bioconductor.org/packages/3.21/books/bin/macosx/big-sur-arm64/contrib/4.5:
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Install dependencies
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
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Install dependencies
Unused dummy argument ‘timed’ at (1) [-Wunused-dummy-argument]
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Install dependencies
Unused dummy argument ‘timed’ at (1) [-Wunused-dummy-argument]
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Install dependencies
Unused dummy argument ‘timed’ at (1) [-Wunused-dummy-argument]
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Install dependencies
Unused dummy argument ‘timed’ at (1) [-Wunused-dummy-argument]
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Install dependencies
Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion]
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Install dependencies
Unused dummy argument ‘nofsub’ at (1) [-Wunused-dummy-argument]
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Install remotes
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
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Test coverage
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
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Install system dependencies (macOS)
cairo 1.18.2 is already installed and up-to-date.
To reinstall 1.18.2, run:
brew reinstall cairo
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Install system dependencies (macOS)
macOS's Gatekeeper has been disabled for this Cask
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Install system dependencies (macOS)
harfbuzz 10.0.1_1 is already installed and up-to-date.
To reinstall 10.0.1_1, run:
brew reinstall harfbuzz
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Install system dependencies (macOS)
fribidi 1.0.16 is already installed and up-to-date.
To reinstall 1.0.16, run:
brew reinstall fribidi
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