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learned_optimization/research/data_driven/README.md

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+# General-Purpose In-Context Learning by Meta-Learning Transformers
+
+Research code for the paper https://arxiv.org/abs/2212.04458

learned_optimization/research/data_driven/data.py

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+# coding=utf-8
+# Copyright 2021 Google LLC
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     https://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
+"""Supervised data loader."""
+
+import functools
+from typing import NamedTuple, Optional, Tuple, Sequence
+
+import gin
+import haiku as hk
+import jax
+import jax.numpy as jnp
+from learned_optimization.research.data_driven import resnet
+import tensorflow.compat.v2 as tf
+import tensorflow_datasets as tfds
+
+
+def standardize(
+    batch: Tuple[jnp.ndarray, jnp.ndarray],
+    has_dataset_dim: bool = True,
+    subsample: int = 0,
+) -> Tuple[jnp.ndarray, jnp.ndarray]:
+  """Z-normalizes the given batch.
+
+  Args:
+    batch: Tuple if images and labels.
+    has_dataset_dim: Whether there is a dataset dimension.
+    subsample: Size of the subsample in batch and sequence dimension.
+
+  Returns:
+    Z-normalized batch.
+  """
+
+  imgs, labels = batch
+  if has_dataset_dim and subsample > 0:
+    # of shape [dataset, batch, sequence, ...]
+    mean = jnp.mean(imgs[0, :subsample, :subsample])
+    std = jnp.std(imgs[0, :subsample, :subsample])
+  elif subsample > 0:
+    # of shape [batch, sequence, ...]
+    mean = jnp.mean(imgs[:subsample, :subsample])
+    std = jnp.std(imgs[:subsample, :subsample])
+  else:
+    mean = jnp.mean(imgs)
+    std = jnp.std(imgs)
+  imgs = (imgs - mean) / (std + 1e-8)
+  return imgs, labels
+
+
+@gin.configurable('preprocess')
+class PreprocessSpec(NamedTuple):
+  """A specification for preprocessing input data.
+
+  Attributes:
+    resize: Target width and height of image.
+    channel_expand: Whether to expand channels to 3 dimensions.
+    use_patches: Whether to create patches for vision-transformer processing.
+  """
+
+  resize: Optional[int] = 14
+  channel_expand: bool = False
+  use_patches: bool = False
+  standardize_sub_sample = 0
+
+
+@gin.configurable()
+class RandomDataset:
+  """A dataset that associcates random observations with random class labels."""
+
+  def __init__(
+      self,
+      key,
+      batch_size: int,
+      dataset_size: Optional[int],
+      sequence_length: int,
+      preprocess_spec: PreprocessSpec,
+      normalize: bool,
+      bias_prob: float = 0.0,
+      image_shape: Sequence[int] = (14, 14),
+      num_datapoints: int = 10,
+      num_classes: int = 10,
+  ):
+    self.rng = hk.PRNGSequence(key)
+    self._batch_size = batch_size
+    self._sequence_length = sequence_length
+    self._dataset_size = dataset_size
+    self._preprocess_spec = preprocess_spec
+    self._normalize = normalize
+    self._bias_prob = bias_prob
+    self._bias_key = next(self.rng)
+    self._image_shape = image_shape
+    self._num_datapoints = num_datapoints
+    self._num_classes = num_classes
+    std_p = functools.partial(
+        standardize,
+        has_dataset_dim=dataset_size is not None,
+        subsample=preprocess_spec.standardize_sub_sample,
+    )
+    self._standardize = jax.jit(std_p)
+
+    if dataset_size is not None:
+      self._next = jax.jit(self._generate_tasks)
+    else:
+      self._next = jax.jit(self._generate_task)
+
+  def _generate_task(self, key):
+    """Generate a new unique task.
+
+    Args:
+      key: A jax PRNGKey
+
+    Returns:
+      A Tuple of images and labels
+    """
+    key_img, key_choice = jax.random.split(key, num=2)
+    del key
+    spec = self._preprocess_spec
+    images = jax.random.uniform(
+        key_img,
+        [self._num_datapoints] + list(self._image_shape),
+        minval=0.0,
+        maxval=1.0,
+    )
+    labels = jax.nn.one_hot(
+        jnp.arange(self._num_datapoints) % self._num_classes, self._num_classes
+    )
+
+    if spec.channel_expand:
+      images = jnp.concatenate([images] * 3, axis=-1)
+    if not spec.use_patches:
+      images = jnp.reshape(images, [self._num_datapoints, -1])
+
+    choice_shape = (self._batch_size, self._sequence_length)
+    indices = jax.random.choice(key_choice, 10, choice_shape)
+    batched_images = images[indices]
+    batched_labels = labels[indices]
+
+    return batched_images, batched_labels
+
+  def _generate_tasks(self, key):
+    key_tasks, key_mask = jax.random.split(key)
+    del key
+    key_tasks = jax.random.split(key_tasks, self._dataset_size)
+    mask = jax.random.bernoulli(
+        key_mask, p=self._bias_prob, shape=(self._dataset_size,))
+    key_tasks = jnp.where(mask[:, None], self._bias_key[None], key_tasks)
+    return jax.vmap(self._generate_task)(key_tasks)
+
+  def __next__(self):
+    item = self._next(next(self.rng))
+    if self._normalize:
+      item = self._standardize(item)
+    return item
+
+  def __iter__(self):
+    return self
+
+
+@gin.configurable()
+class DataLoader:
+  """Loads a specific tensorflow dataset and processes data for experiment."""
+
+  DATASET_STATS = {
+      'cifar10': {'mean': 0.4733630120754242, 'std': 0.2515689432621002},
+      'fashion_mnist': {'mean': 0.13066047430038452, 'std': 0.3081078827381134},
+      'mnist': {'mean': 0.13066047430038452, 'std': 0.3081078827381134},
+      'svhn_cropped': {'mean': 0.4514186382293701, 'std': 0.19929124414920807},
+      'random': {'mean': 0.0, 'std': 1.0},
+      'sum': {'mean': 0.0, 'std': 1.0},
+      'emnist': {'mean': 0.1739204376935959, 'std': 0.3319065570831299},
+      'kmnist': {'mean': 0.19176216423511505, 'std': 0.34834328293800354},
+      'omniglot': {'mean': 0.9220603108406067, 'std': 0.26807650923728943},
+      'omniglot_fewshot': {
+          'mean': 0.9220603108406067,
+          'std': 0.26807650923728943,
+      },
+  }
+
+  def __init__(
+      self,
+      dataset_name: str,
+      num_classes=10,
+      shuffle_size=10000,
+      prefetch_size=10,
+      sequence_length=100,
+      preprocess_spec=None,
+      normalize=True,
+      use_fixed_ds_stats: bool = False,
+      pretrained_embed: bool = False,
+  ):
+    self._num_classes = num_classes
+    self._dataset_name = dataset_name
+    self._shuffle_size = shuffle_size
+    self._prefetch_size = prefetch_size
+    self._sequence_length = sequence_length
+    self._preprocess_spec = preprocess_spec or PreprocessSpec()
+    self._normalize = normalize
+    self._use_fixed_ds_stats = use_fixed_ds_stats
+    self._pretrained_embed = pretrained_embed
+
+    # Load pre-trained embedding params
+    if pretrained_embed:
+      self._params_embed = resnet.load_params()
+      self._resnet_embed = jax.jit(resnet.embed)
+
+  def get_dataset(
+      self,
+      set_name: str,
+      batch_size: int,
+      dataset_name: Optional[str] = None,
+      dataset_size: Optional[int] = None,
+      key: Optional[jax.Array] = None,
+  ):
+    """Create numpy iterator of dataset specified by dataset_name.
+
+    Args:
+      set_name: Dataset subset to load.
+      batch_size: Batch size of returned data.
+      dataset_name: Name of dataset to load.
+      dataset_size: Number of datasets to return each iteration.
+      key: An optional key to use for jax-based datasets.
+
+    Returns:
+      Numpy iterator of data.
+    """
+    if dataset_name is None:
+      dataset_name = self._dataset_name
+
+    if dataset_name == 'random':
+      ds = RandomDataset(key, batch_size, dataset_size, self._sequence_length,
+                         self._preprocess_spec, self._normalize)
+      return iter(ds)
+    else:
+      return self._get_tf_dataset(set_name, batch_size, dataset_name,
+                                  dataset_size)
+
+  def _get_tf_dataset(self,
+                      set_name: str,
+                      batch_size: int,
+                      dataset_name: Optional[str] = None,
+                      dataset_size: Optional[int] = None):
+    """Create numpy iterator of tensorflow dataset.
+
+    Args:
+      set_name: Dataset subset to load.
+      batch_size: Batch size of returned data.
+      dataset_name: Name of dataset to load.
+      dataset_size: Number of datasets to return each iteration.
+
+    Returns:
+      Numpy iterator of tensorflow dataset.
+    """
+    ds = tfds.load(dataset_name, split=set_name)
+    if self._pretrained_embed:
+      ds = ds.map(self._process)
+      ds = ds.shuffle(self._shuffle_size)
+
+      def embed(*args):
+        return tf.py_function(self._embed, list(args), (tf.float32, tf.float32))
+
+      ds = ds.batch(128).map(embed).unbatch().cache()
+    else:
+      ds = ds.map(self._process).cache()
+    ds = ds.repeat().shuffle(self._shuffle_size)
+    ds = ds.batch(self._sequence_length).batch(batch_size)
+    if dataset_size is not None:
+      ds = ds.batch(dataset_size)
+    ds = ds.prefetch(self._prefetch_size)
+
+    itr = ds.as_numpy_iterator()
+    if not self._use_fixed_ds_stats and self._normalize:
+      std_p = functools.partial(
+          standardize,
+          has_dataset_dim=dataset_size is not None,
+          subsample=self._preprocess_spec.standardize_sub_sample,
+      )
+      itr = map(jax.jit(std_p), itr)
+    return itr
+
+  def _embed(self, x, y):
+    x = self._resnet_embed(self._params_embed, x.numpy())
+    x = (x - jnp.mean(x)) / jnp.std(x)
+    x = jax.nn.tanh(x)
+    x = x.reshape((x.shape[0], -1))
+    return x, y
+
+  def _process(self, x):
+    """Preprocesses vision data.
+
+    Args:
+      x: Each element of the dataset iterator.
+
+    Returns:
+      A tuple of image and label after processing.
+    """
+    img = x['image']
+    spec = self._preprocess_spec
+    if spec.resize:
+      img = tf.image.resize(img, [spec.resize, spec.resize])
+    if spec.channel_expand and img.shape[-1] == 1:
+      img = tf.concat([img] * 3, axis=-1)
+    if not spec.use_patches:
+      img = tf.reshape(img, [-1])
+    # TODO(lkirsch) keep uint
+    img = tf.cast(img, tf.float32) / 255
+
+    if self._use_fixed_ds_stats:
+      stats = self.DATASET_STATS[self._dataset_name]
+      img = (img - stats['mean']) / stats['std']
+
+    label = tf.one_hot(x['label'], self._num_classes)
+    return img, label