got pypi running (at least preliminary)

needed to introduce some intermediate version numbers

MANIFEST.in

@@ -1,4 +1,6 @@
 recursive-include examples *.py *.png
 recursive-include scripts *.py *.png
-recursive-include http-server *.py *.sh
-recursive-include docs *
+recursive-include http_server *.py *.sh
+recursive-include docs *
+global-include *.pyx
+global-include *.pxd

README.md

@@ -14,30 +14,41 @@ It tries to simplify following tasks:
 
 Documentation is available at [larda-doc](https://lacros-tropos.github.io/larda-doc/)
 
+### Quick Setup (pypi)
+
+```
+python3 -m venv larda-env
+source larda-env/bin/activate
+
+pip install setuptools -U
+pip install cython
+pip install pyLARDA
+```
+
 ### Requirements
 Currently pyLARDA is only targeted on unix operating system. 
 
 ```
-matplotlib==3.0.2
-toml==0.10.0
-numpy>=1.19
-requests==2.9.1
-netCDF4==1.4.2
-scipy==1.2.0
+numpy==1.21
+scipy>=1.6
+netCDF4>=1.4.2
 msgpack
-tqdm
-numba
-cython
+cython>=0.29.13
 xarray
+matplotlib>=3.0.2
+requests>=2.21
+toml>=0.10.0
+tqdm>=4.36.1
+numba>=0.45.1
 # and for the documentation
 sphinx
 recommonmark
 sphinx_rtd_theme
 ```
 
-### Quick Setup
+### Setup (github)
 
-The pyLARDA module can be installed with:
+For development, local data sources and the backend, pyLARDA module can be installed with:
 ```
 python3 -m venv larda-env
 source larda-env/bin/activate

docs/source/index.rst

@@ -19,6 +19,7 @@ pyLARDA documentation
    peakTree.rst
    spectra.rst
    api_overview.rst
+   package.rst
    contributors.rst
 
 

docs/source/package.rst

@@ -0,0 +1,20 @@
+
+####################################
+PyPi package
+####################################
+
+
+Adapt ther version number (also in the download_url).
+Remove the (autogenerated c file)
+
+
+.. code-block:: python
+
+    python3 setup.py sdist
+    # check build files
+    python3 -m twine check dist/*
+    tar tzf dist/pyLARDA-3.3.tar.gz
+    # upload to test server
+    python3 -m twine upload --repository testpypi dist/* 
+    #
+    python3 -m twine upload dist/*

pyLARDA/__init__.py

@@ -246,4 +246,5 @@ def __init__(self, info_dict):
         self.CONFIGURATION_FILE = self.info_dict["param_config_file"]
         self.LOCATION = self.info_dict["location"]
 
-        self.INFO_TEXT = ''
+        self.INFO_TEXT = ''
+

pyLARDA/__main__.py

@@ -0,0 +1,10 @@
+#!/usr/bin/python3
+# coding=utf-8
+"""
+
+
+"""
+
+import pyLARDA
+
+print(pyLARDA.LARDA())

pyLARDA/_meta.py

@@ -1,6 +1,6 @@
 
 
-__version__ = "3.3"
+__version__ = "3.3.2"
 __author__ = "pyLARDA-dev-team"
 __doc_link__ = "https://lacros-tropos.github.io/larda-doc/"
 

setup.py

@@ -16,16 +16,19 @@
 #    verstr = mo.group(1)
 #else:
 #    raise RuntimeError("Unable to find version string in %s." % (VERSIONFILE,))
-from pyLARDA import __version__ as verstr
-from pyLARDA import __author__ as authorstr
+#from pyLARDA import __version__ as verstr
+#from pyLARDA import __author__ as authorstr
+meta = {}
+with open("pyLARDA/_meta.py") as fp:
+    exec(fp.read(), meta)
 
 setup(
     name='pyLARDA',
-    version=verstr,
+    version=meta['__version__'],
     description='Data cube for handling atmospheric observations of profiling remote sensing instruments.',
     long_description=readme,
     long_description_content_type='text/markdown',
-    author=authorstr,
+    author=meta['__author__'],
     author_email='[email protected]',
     url='https://github.com/lacros-tropos/larda',
     download_url='https://github.com/lacros-tropos/larda/archive/refs/tags/v3.3.tar.gz',
@@ -35,9 +38,9 @@
     python_requires='>=3.8',
     # automatic installation of the dependencies did not work with the test.pypi
     # below the try to fix it
-    setup_requires=['wheel', 'numpy>=1.19', 'scipy>=1.6', 'netCDF4>=1.4.2', 'msgpack', 'cython>=0.29.13', 'xarray',
+    setup_requires=['wheel', 'numpy==1.21', 'scipy>=1.6', 'netCDF4>=1.4.2', 'msgpack', 'cython>=0.29.13', 'xarray',
                       'matplotlib>=3.0.2', 'requests>=2.21', 'toml>=0.10.0', 'tqdm>=4.36.1', 'numba>=0.45.1'],
-    install_requires=['numpy>=1.19', 'scipy>=1.6', 'netCDF4>=1.4.2', 'msgpack', 'cython>=0.29.13', 'xarray',
+    install_requires=['numpy==1.21', 'scipy>=1.6', 'netCDF4>=1.4.2', 'msgpack', 'cython>=0.29.13', 'xarray',
                       'matplotlib>=3.0.2', 'requests>=2.21', 'toml>=0.10.0', 'tqdm>=4.36.1', 'numba>=0.45.1'],
     ext_modules=cythonize("pyLARDA/peakTree_fastbuilder.pyx"),
     classifiers=[