Add comparison to reference

test/compare_outputs.py

@@ -169,6 +169,9 @@ def compare_results(dcmp, rtol, verbosity):
     :param float rtol: relative tolerance threshold
     :param int verbosity: verbosity level, higher means more verbose
     """
+    # Initialize logger and set log level depending on verbosity level
+    init_logger(verbosity)
+
     logger.info("*** Comparing results in '%s' and '%s' ***", dcmp.left, dcmp.right)
     agree = True
     for dname, sub_dcmp in dcmp.subdirs.items():
@@ -390,9 +393,6 @@ def main(args):
     # to the number of times the command-line option `-v` is given.
     verbosity = -1 if args.quiet else args.verbose
 
-    # Initialize logger and set log level depending on verbosity level
-    init_logger(verbosity)
-
     agree = True
     if not compare_results(
         filecmp.dircmp(args.first, args.second),

test/reference_outputs/catalogues/tbdsf_process_image.in_fits.pybdsf.gaul.ds9.reg

@@ -0,0 +1,50 @@
+# Region file format: DS9 version 4.0
+global color=green font="helvetica 10 normal" select=1 highlite=1 edit=1 move=1 delete=1 include=1 fixed=0 source
+fk5
+ellipse(258.2511424619819,64.16025586065186,56.95589404879862",53.02072590238923",97.34138964670434) # text={tbdsf_process_image.in_fits_w0_i0_s0_g0}
+ellipse(258.25371011222387,64.15176765964492,63.658729646675596",42.87610608631838",222.5358699416813) # text={tbdsf_process_image.in_fits_w0_i0_s0_g1}
+ellipse(258.1871527478031,64.29219530186056,76.17217278648221",63.973419748499296",111.96815573659971) # text={tbdsf_process_image.in_fits_w0_i2_s3_g2}
+ellipse(258.1815520143971,64.27140665312471,54.0",54.0",90.0) # text={tbdsf_process_image.in_fits_w0_i2_s4_g3}
+ellipse(258.093421047197,64.14194417623547,57.80855021986335",43.42670686324026",262.45456847114053) # text={tbdsf_process_image.in_fits_w0_i3_s5_g4}
+ellipse(258.1503422176401,64.44774926885286,54.55743004586177",50.34983247258747",131.47501650968198) # text={tbdsf_process_image.in_fits_w0_i4_s6_g5}
+ellipse(258.046191733356,64.26088166904505,64.04313914784925",50.74540770094594",242.48991877105436) # text={tbdsf_process_image.in_fits_w0_i5_s7_g6}
+ellipse(257.99781136162756,64.2782401932823,71.11671861687377",62.02919671446578",244.1653914808416) # text={tbdsf_process_image.in_fits_w0_i5_s8_g7}
+ellipse(258.0156809310393,64.22778509088576,53.318660590778414",45.42587723746053",98.28277970714305) # text={tbdsf_process_image.in_fits_w0_i6_s9_g8}
+ellipse(257.9451057562919,64.48652523174617,54.64468675628351",47.388815151017305",263.5993219377618) # text={tbdsf_process_image.in_fits_w0_i7_s10_g9}
+ellipse(257.8647419115774,64.78652596378484,104.04390876347748",51.891891046969356",149.01004353114092) # text={tbdsf_process_image.in_fits_w0_i8_s11_g10}
+ellipse(257.8503829143695,64.28349715094954,49.50311733523201",42.15506869421105",95.33858874919117) # text={tbdsf_process_image.in_fits_w0_i9_s12_g11}
+ellipse(257.7213890038119,64.84279836199923,53.98492543542282",47.15908245252569",90.20962222594548) # text={tbdsf_process_image.in_fits_w0_i10_s13_g12}
+ellipse(257.73869443677904,64.86187739021612,54.091914671344064",46.788645102577306",242.6811875689067) # text={tbdsf_process_image.in_fits_w0_i10_s14_g13}
+ellipse(257.69081773664294,64.19941539764326,74.54047149054797",42.078282382899836",236.52661581965697) # text={tbdsf_process_image.in_fits_w0_i11_s15_g14}
+ellipse(257.6396093933974,64.50232583128762,60.03732755563492",52.685545682686104",264.5857052678835) # text={tbdsf_process_image.in_fits_w0_i12_s16_g15}
+ellipse(257.66083513239187,64.49364149805737,55.08431016428197",52.243725096233035",97.17749060355095) # text={tbdsf_process_image.in_fits_w0_i12_s16_g16}
+ellipse(257.6344577717749,64.65420358487933,54.01018900836802",46.55568475608075",107.32829401573616) # text={tbdsf_process_image.in_fits_w0_i13_s17_g17}
+ellipse(257.60225742507276,64.75506491342287,53.910101075414865",49.408138087621914",267.6810178793629) # text={tbdsf_process_image.in_fits_w0_i14_s18_g18}
+ellipse(257.58257740600834,64.46392925675445,49.90299411594646",44.3784963984662",100.21810973375887) # text={tbdsf_process_image.in_fits_w0_i15_s19_g19}
+ellipse(257.4423045498979,64.759990550475,56.68264272841056",50.71058017075928",102.06398439930219) # text={tbdsf_process_image.in_fits_w0_i16_s20_g20}
+ellipse(257.42333481698086,64.55903004544432,64.83490695465368",49.882545343986294",90.57380216009787) # text={tbdsf_process_image.in_fits_w0_i17_s21_g21}
+ellipse(257.30095308559964,64.5123741149839,47.56279301254615",43.02542405157786",263.0886985403256) # text={tbdsf_process_image.in_fits_w0_i18_s22_g22}
+ellipse(257.26674323404137,64.61898160240014,62.410394574342014",47.4124573258624",129.52544425154795) # text={tbdsf_process_image.in_fits_w0_i19_s23_g23}
+ellipse(257.23468631523485,64.32713536091964,52.610296045452685",47.51459798070709",262.56493135628864) # text={tbdsf_process_image.in_fits_w0_i20_s24_g24}
+ellipse(257.1764561696155,64.18189461882822,51.90666531490877",45.51373228140054",262.77595019068735) # text={tbdsf_process_image.in_fits_w0_i21_s25_g25}
+ellipse(257.1632403866559,64.6428658819653,52.700500420024",43.5189098446929",268.4385005858985) # text={tbdsf_process_image.in_fits_w0_i22_s26_g26}
+ellipse(257.13875379767876,64.79579767610417,49.92584826467388",46.20852785798526",248.6485253776974) # text={tbdsf_process_image.in_fits_w0_i23_s27_g27}
+ellipse(257.1135520180855,64.33392310177568,68.4035859878593",46.30955104023591",173.38751422609968) # text={tbdsf_process_image.in_fits_w0_i24_s28_g28}
+ellipse(257.06468468786704,64.72465970384042,51.35528478921363",43.713513279346515",258.7273777795446) # text={tbdsf_process_image.in_fits_w0_i25_s29_g29}
+ellipse(257.045761070189,64.36824182809686,53.669684520584674",46.11957891417484",258.907969315846) # text={tbdsf_process_image.in_fits_w0_i26_s30_g30}
+ellipse(257.01434187399275,64.20604763984578,57.51319900144749",50.899648055649216",266.557984426086) # text={tbdsf_process_image.in_fits_w0_i27_s31_g31}
+ellipse(256.9843362709805,64.41157493912749,61.297649656745214",54.92361707178796",264.45101513938073) # text={tbdsf_process_image.in_fits_w0_i28_s32_g32}
+ellipse(256.92613526624456,64.57057764709074,59.41732406181857",50.924313306484805",143.5013369314473) # text={tbdsf_process_image.in_fits_w0_i29_s33_g33}
+ellipse(256.7857983686765,64.29133805242569,52.95805787861601",43.477725752684385",123.42895351001874) # text={tbdsf_process_image.in_fits_w0_i30_s34_g34}
+ellipse(256.54473828550465,64.63689344768626,64.85487973990224",58.8411079036806",234.00031800258637) # text={tbdsf_process_image.in_fits_w0_i31_s35_g35}
+ellipse(256.5896217981064,64.63398472722695,58.85145889276077",52.196620405593684",93.65533301933759) # text={tbdsf_process_image.in_fits_w0_i31_s35_g36}
+ellipse(256.59815349256667,64.45705801832372,50.47002703760068",45.72201056341276",93.10958555125501) # text={tbdsf_process_image.in_fits_w0_i32_s36_g37}
+ellipse(258.2611685188704,64.12835497634481,71.38302695189722",61.34185797770986",204.49287015601726) # text={tbdsf_process_image.in_fits_w1_i0_s1_g38}
+ellipse(258.24513407259985,64.25646193189363,192.3383506915263",103.018035322796",259.06144996185645) # text={tbdsf_process_image.in_fits_w1_i1_s2_g39}
+ellipse(257.88251201226353,64.82080633573042,84.97941601280974",69.8589801992316",210.329189405195) # text={tbdsf_process_image.in_fits_w1_i33_s37_g40}
+ellipse(257.64671519635857,64.33523602298614,77.88132319892163",60.13897485661405",188.84470789369328) # text={tbdsf_process_image.in_fits_w1_i34_s38_g41}
+ellipse(258.0883526867579,64.13715578480745,295.4883857419636",169.92811183172842",170.99929990931514) # text={tbdsf_process_image.in_fits_w2_i35_s39_g42}
+ellipse(256.98945147717706,64.42230185766715,184.744224618808",135.37063921192913",250.2217892089082) # text={tbdsf_process_image.in_fits_w1_i28_s32_g42}
+ellipse(256.56442946100174,64.66077133389386,95.67557338245035",66.61554417633998",241.2443814269841) # text={tbdsf_process_image.in_fits_w1_i31_s35_g43}
+ellipse(257.87356790460865,64.23258801868865,124.71415563256329",70.72864188376109",173.69873097936664) # text={tbdsf_process_image.in_fits_w0_i35_s40_g43}
+ellipse(257.69488651301947,64.44949571530312,163.29237664410647",87.82455391656632",200.95860758906485) # text={tbdsf_process_image.in_fits_w0_i36_s41_g44}

test/reference_outputs/catalogues/tbdsf_process_image.in_fits.pybdsf.kvis.ann

@@ -0,0 +1,98 @@
+### KVis annotation file
+
+color green
+
+text    258.25114   64.16026   0
+ellipse  258.25114   64.16026    0.0158211  0.0147280     7.3414
+text    258.25371   64.15177   0
+ellipse  258.25371   64.15177    0.0176830  0.0119100   132.5359
+text    258.26117   64.12835   0
+ellipse  258.26117   64.12835    0.0198286  0.0170394   114.4929
+text    258.24513   64.25646   1
+ellipse  258.24513   64.25646    0.0534273  0.0286161   169.0614
+text    258.18715   64.29220   2
+ellipse  258.18715   64.29220    0.0211589  0.0177704    21.9682
+text    258.18155   64.27141   2
+ellipse  258.18155   64.27141    0.0150000  0.0150000     0.0000
+text    258.09342   64.14194   3
+ellipse  258.09342   64.14194    0.0160579  0.0120630   172.4546
+text    258.15034   64.44775   4
+ellipse  258.15034   64.44775    0.0151548  0.0139861    41.4750
+text    258.04619   64.26088   5
+ellipse  258.04619   64.26088    0.0177898  0.0140959   152.4899
+text    257.99781   64.27824   5
+ellipse  257.99781   64.27824    0.0197546  0.0172303   154.1654
+text    258.01568   64.22779   6
+ellipse  258.01568   64.22779    0.0148107  0.0126183     8.2828
+text    257.94511   64.48653   7
+ellipse  257.94511   64.48653    0.0151791  0.0131636   173.5993
+text    257.86474   64.78653   8
+ellipse  257.86474   64.78653    0.0289011  0.0144144    59.0100
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+ellipse  257.85038   64.28350    0.0137509  0.0117097     5.3386
+text    257.72139   64.84280   10
+ellipse  257.72139   64.84280    0.0149958  0.0130997     0.2096
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+text    257.69082   64.19942   11
+ellipse  257.69082   64.19942    0.0207057  0.0116884   146.5266
+text    257.63961   64.50233   12
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+text    257.66084   64.49364   12
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