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Releases: mccoy-lab/LD-PGTA

LD-PGTA

31 Mar 14:19
@scikal scikal
v3.00
6ef90e0
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This release of LD-PGTA introduces a new format for the reference panels, which gives improved performance.

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LD-PGTA

18 Jan 15:59
@scikal scikal
v2.54
bd8a1f2
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LD-PGTA

Minor improvements and bug fixes.

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LD-PGTA

22 Dec 03:59
@scikal scikal
v2.53
9c1c22a
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Minor improvements and bug fixes.

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LD-PGTA

20 Dec 21:23
@scikal scikal
v2.52
1edf33d
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Minor improvements and bug fixes.

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LD-PGTA

19 Nov 23:33
@scikal scikal
v2.51
323d253
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LD-PGTA

--- Added support to distant admixture between any number of populations.
--- Added a module to generate a test reference panel as well as a test sample.
--- Fixed bugs related to argument parsing in ANEUPLOIDY_TEST.
--- Reference panels can be created via cyvcf2, bcftools and pysam. The best performance are achieved with cyvcf2.
--- Now supports Python 3.9 and above.

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LD-PGTA

29 Oct 00:18
@rmccoy7541 rmccoy7541
v2.44
323d253
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LD-PGTA

Archived to Zenodo.

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LD-PGTA

16 Sep 23:44
@scikal scikal
v2.43
323d253
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Using the terminology recent-admixtures instead of F1-admixtures.

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LD-PGTA

16 Sep 17:53
@scikal scikal
v2.42
323d253
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Slight improvement for sequences with a depth of coverage above 0.1x.

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LD-PGTA

29 Aug 04:16
@scikal scikal
v2.41
163a71f
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The reference panels are now encoded as binary files for efficient storage and retrieval.

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LD-PGTA

25 Aug 19:18
@scikal scikal
v2.4
276f141
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Added support for complex admixtures.

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