Use gtdb r220 in full test

nf-core · Jan 9, 2025 · 277e136 · 277e136
1 parent 54ea4f2
commit 277e136
Showing 1 changed file with 1 addition and 2 deletions.
diff --git a/conf/test_full.config b/conf/test_full.config
@@ -22,8 +22,7 @@ params {
     //centrifuge_db = "s3://ngi-igenomes/test-data/mag/p_compressed+h+v.tar.gz"
     kraken2_db                 = "s3://ngi-igenomes/test-data/mag/minikraken_8GB_202003.tgz"
     cat_db                     = "s3://ngi-igenomes/test-data/mag/CAT_prepare_20210107.tar.gz"
-    // gtdb_db       = "s3://ngi-igenomes/test-data/mag/gtdbtk_r214_data.tar.gz" ## This should be updated to release 220, once we get GTDB-Tk working again
-    skip_gtdbtk                = true
+    gtdb_db                    = "s3://ngi-igenomes/test-data/mag/gtdbtk_r220_data.tar.gz"
 
     // TODO TEMPORARY: deactivate SPAdes due to incompatibility of container with fusion file system
     skip_spades                = true