Merge pull request #2206 from obophenotype/1149-obsolete-barrier_epit…

…helial_and_sem_fluid_secreting_cell Addresses #1149 obsolete 'barrier epithelial cell' and 'seminal flui…
obophenotype · Oct 20, 2023 · 2b5355d · 2b5355d
2 parents f7936b8 + ccdc450
commit 2b5355d
Showing 1 changed file with 13 additions and 8 deletions.
diff --git a/src/ontology/cl-edit.owl b/src/ontology/cl-edit.owl
@@ -4125,10 +4125,12 @@ AnnotationAssertion(rdfs:label obo:CL_0000072 "non-branched duct epithelial cell
 SubClassOf(obo:CL_0000072 obo:CL_0000068)
 SubClassOf(obo:CL_0000072 ObjectSomeValuesFrom(obo:RO_0002202 obo:CL_0000222))
 
-# Class: obo:CL_0000073 (barrier epithelial cell)
+# Class: obo:CL_0000073 (obsolete barrier epithelial cell)
 
-AnnotationAssertion(rdfs:label obo:CL_0000073 "barrier epithelial cell")
-SubClassOf(obo:CL_0000073 obo:CL_0000066)
+AnnotationAssertion(obo:IAO_0100001 obo:CL_0000073 obo:CL_0000215)
+AnnotationAssertion(rdfs:comment obo:CL_0000073 "https://github.com/obophenotype/cell-ontology/issues/1149")
+AnnotationAssertion(rdfs:label obo:CL_0000073 "obsolete barrier epithelial cell")
+AnnotationAssertion(owl:deprecated obo:CL_0000073 "true"^^xsd:boolean)
 
 # Class: obo:CL_0000074 (obsolete epithem cell)
 
@@ -6246,10 +6248,13 @@ AnnotationAssertion(oboInOwl:hasExactSynonym obo:CL_0000320 "megaspore mother ce
 AnnotationAssertion(rdfs:label obo:CL_0000320 "obsolete megasporocyte")
 AnnotationAssertion(owl:deprecated obo:CL_0000320 "true"^^xsd:boolean)
 
-# Class: obo:CL_0000321 (seminal fluid secreting cell)
+# Class: obo:CL_0000321 (obsolete seminal fluid secreting cell)
 
-AnnotationAssertion(rdfs:label obo:CL_0000321 "seminal fluid secreting cell")
-SubClassOf(obo:CL_0000321 obo:CL_0000151)
+AnnotationAssertion(obo:IAO_0100001 obo:CL_0000321 obo:CL_0000151)
+AnnotationAssertion(oboInOwl:consider obo:CL_0000321 obo:CL_1001597)
+AnnotationAssertion(rdfs:comment obo:CL_0000321 "https://github.com/obophenotype/cell-ontology/issues/1149")
+AnnotationAssertion(rdfs:label obo:CL_0000321 "obsolete seminal fluid secreting cell")
+AnnotationAssertion(owl:deprecated obo:CL_0000321 "true"^^xsd:boolean)
 
 # Class: obo:CL_0000322 (pneumocyte)
 
@@ -17045,11 +17050,11 @@ AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:19022771") oboInOwl:hasB
 AnnotationAssertion(oboInOwl:hasDbXref obo:CL_0002325 "FMA:74506")
 AnnotationAssertion(oboInOwl:hasDbXref obo:CL_0002325 "FMA:79866")
 AnnotationAssertion(oboInOwl:hasExactSynonym obo:CL_0002325 "epithelial cell of lactiferous gland")
+AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:35091553") oboInOwl:hasExactSynonym obo:CL_0002325 "lactaction-associated mammary epithelial cell")
+AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:35091553") oboInOwl:hasExactSynonym obo:CL_0002325 "lactation-derived mammary cell")
 AnnotationAssertion(oboInOwl:hasExactSynonym obo:CL_0002325 "luminal cell of alveolus of lactiferous gland")
 AnnotationAssertion(oboInOwl:hasExactSynonym obo:CL_0002325 "mammary alveolar epithelial cell")
 AnnotationAssertion(oboInOwl:hasExactSynonym obo:CL_0002325 "mammary gland alveolar epithelial cell")
-AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:35091553") oboInOwl:hasExactSynonym obo:CL_0002325 "lactaction-associated mammary epithelial cell")
-AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:35091553") oboInOwl:hasExactSynonym obo:CL_0002325 "lactation-derived mammary cell")
 AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:35091553") Annotation(oboInOwl:hasSynonymType obo:OMO_0003000) oboInOwl:hasRelatedSynonym obo:CL_0002325 "LMC")
 AnnotationAssertion(rdfs:label obo:CL_0002325 "lactocyte")
 EquivalentClasses(obo:CL_0002325 ObjectIntersectionOf(obo:CL_0000150 ObjectSomeValuesFrom(obo:BFO_0000050 obo:UBERON_0003214)))