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openproblems-bio / task_spatially_variable_genes Public

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Test

fix docker setup #8

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fix docker setup

fix docker setup #8

Summary
Jobs
- List components to test
  
  Test (spatialde, methods, src/methods/spatialde/config.vsh.yaml, src/methods/spatialde/, python_s...
  
  Test (spanve, methods, src/methods/spanve/config.vsh.yaml, src/methods/spanve/, python_script, me...
  
  Test (spagft, methods, src/methods/spagft/config.vsh.yaml, src/methods/spagft/, python_script, me...
  
  Test (spatialde2, methods, src/methods/spatialde2/config.vsh.yaml, src/methods/spatialde2/, pytho...
  
  Test (boostgp, methods, src/methods/boostgp/config.vsh.yaml, src/methods/boostgp/, r_script, meth...
  
  Test (gpcounts, methods, src/methods/gpcounts/config.vsh.yaml, src/methods/gpcounts/, python_scri...
  
  Test (scgco, methods, src/methods/scgco/config.vsh.yaml, src/methods/scgco/, python_script, metho...
  
  Test (spagcn, methods, src/methods/spagcn/config.vsh.yaml, src/methods/spagcn/, python_script, me...
  
  Test (spark, methods, src/methods/spark/config.vsh.yaml, src/methods/spark/, r_script, methods/sp...
  
  Test (somde, methods, src/methods/somde/config.vsh.yaml, src/methods/somde/, python_script, metho...
  
  Test (sepal, methods, src/methods/sepal/config.vsh.yaml, src/methods/sepal/, python_script, metho...
  
  Test (moran_i, methods, src/methods/moran_i/config.vsh.yaml, src/methods/moran_i/, python_script,...
  
  Test (nnsvg, methods, src/methods/nnsvg/config.vsh.yaml, src/methods/nnsvg/, r_script, methods/nn...
  
  Test (spark_x, methods, src/methods/spark_x/config.vsh.yaml, src/methods/spark_x/, r_script, meth...
  
  Test (split_dataset, process_dataset, src/process_dataset/split_dataset/config.vsh.yaml, src/proc...
  
  Test (simulate_svg, process_dataset, src/process_dataset/simulate_svg/config.vsh.yaml, src/proces...
  
  Test (select_reference, process_dataset, src/process_dataset/select_reference/config.vsh.yaml, sr...
  
  Test (correlation, metrics, src/metrics/correlation/config.vsh.yaml, src/metrics/correlation/, py...
  
  Test (random_ranking, control_methods, src/control_methods/random_ranking/config.vsh.yaml, src/co...
  
  Test (true_ranking, control_methods, src/control_methods/true_ranking/config.vsh.yaml, src/contro...
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- Usage
- Workflow file

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fix docker setup #8

build / Test (sepal, methods, src/methods/sepal/config.vsh.yaml, src/methods/sepal/, python_script, metho...

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