Conversion from & to SingleCellExperiment #646
LouiseDckAnnotations
1 error and 11 warnings
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lint
Process completed with exit code 31.
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lint
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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lint:
R/SingleCellExperiment.R#L165
file=R/SingleCellExperiment.R,line=165,col=7,[object_usage_linter] local variable 'x' assigned but may not be used
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lint:
R/SingleCellExperiment.R#L166
file=R/SingleCellExperiment.R,line=166,col=9,[spaces_left_parentheses_linter] Place a space before left parenthesis, except in a function call.
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lint:
R/SingleCellExperiment.R#L166
file=R/SingleCellExperiment.R,line=166,col=30,[brace_linter] There should be a space before an opening curly brace.
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lint:
R/SingleCellExperiment.R#L166
file=R/SingleCellExperiment.R,line=166,col=30,[paren_body_linter] There should be a space between a right parenthesis and a body expression.
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lint:
R/SingleCellExperiment.R#L176
file=R/SingleCellExperiment.R,line=176,col=55,[object_usage_linter] no visible global function definition for 'assay'
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lint:
R/SingleCellExperiment.R#L184
file=R/SingleCellExperiment.R,line=184,col=54,[brace_linter] There should be a space before an opening curly brace.
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lint:
R/SingleCellExperiment.R#L184
file=R/SingleCellExperiment.R,line=184,col=54,[paren_body_linter] There should be a space between a right parenthesis and a body expression.
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lint:
R/SingleCellExperiment.R#L192
file=R/SingleCellExperiment.R,line=192,col=38,[object_usage_linter] no visible global function definition for 'reducedDim'
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lint:
R/SingleCellExperiment.R#L194
file=R/SingleCellExperiment.R,line=194,col=38,[object_usage_linter] no visible global function definition for 'metadata'
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lint:
R/SingleCellExperiment.R#L195
file=R/SingleCellExperiment.R,line=195,col=10,[trailing_whitespace_linter] Trailing whitespace is superfluous.
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