updated vignette to include data on analysis with replicates #110
Annotations
5 errors and 10 warnings
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Run r-lib/actions/check-r-package@v1
--- re-building 'User_Manual.Rmd' using rmarkdown
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Run r-lib/actions/check-r-package@v1
processing vignette 'User_Manual.Rmd' failed with diagnostics:
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Run r-lib/actions/check-r-package@v1
Vignette re-building failed.
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Run r-lib/actions/check-r-package@v1
Build process failed
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Run r-lib/actions/check-r-package@v1
Process completed with exit code 1.
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Run r-lib/actions/setup-r-dependencies@v1
r-lib/actions/setup-r-dependencies@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because 'v2' workflows are much simpler than 'v1' workflows.
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Run r-lib/actions/setup-r-dependencies@v1
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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Run r-lib/actions/setup-r-dependencies@v1
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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Run r-lib/actions/check-r-package@v1
r-lib/actions/check-r-package@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because 'v2' workflows are much simpler than 'v1' workflows.
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Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2, r-lib/actions/setup-pandoc@v1, r-lib/actions/setup-r@v1, actions/cache@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, r-lib/actions/setup-pandoc@v1, r-lib/actions/setup-r@v1, actions/cache@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Run r-lib/actions/setup-pandoc@v1
r-lib/actions/setup-pandoc@v1 is deprecated. Please update your workflow to use the 'v2' version.
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Upload check results
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Run r-lib/actions/setup-r@v1
r-lib/actions/setup-r@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because '@v2' workflows are much simpler than 'v1' workflows.
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Run r-lib/actions/setup-r@v1
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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