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24 Open 14 Closed
24 Open 14 Closed
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Issues list

Combining IsoSeq long reads with stranded (rf) short reads.
#44 opened Jan 10, 2025 by JohnUrban
7
How does Psiclass generate the psiclass_vote.gtf file?
#43 opened Dec 29, 2024 by dgodin19
2
Low complexity read filtering step in FindJunctions.cpp is broken for long reads
#41 opened Dec 10, 2024 by mbeavitt
2
3
Terminated
#35 opened Apr 18, 2024 by edugenetico
Stuck in one region
#33 opened Dec 11, 2023 by s-kyungyong
1
your latest preprint...
#32 opened Sep 30, 2023 by lefterov
3
Experiencing very slow run-time
#31 opened Aug 11, 2023 by tcashby
9
Possible risks of including multiple datasets with different library features.
#29 opened Dec 23, 2022 by Pentayouth
2
Dockerfile
#28 opened May 24, 2022 by ens-ftricomi
1
Conda install does not work
#27 opened May 9, 2022 by Shellfishgene
3
Is XS tag indispensable for strand-specific RNA-seq library?
#25 opened May 2, 2022 by Pentayouth
17
Open: No such file or directory while running psiclass/classes
#22 opened Nov 10, 2021 by Atari61
9
Strategy Question for genome annotation
#20 opened Aug 9, 2021 by sanyalab
4
Segmenation fault when using add-genename script
#19 opened Jul 14, 2021 by cc-prolix
1
Incorrect assemblies generated by PsiCLASS
#17 opened Apr 13, 2021 by sagnikbanerjee15
Read quality scores, indels and substitution
#15 opened Jan 12, 2021 by sagnikbanerjee15
6
Running into segfault error 11
#12 opened Oct 9, 2020 by Akazhiel
19
Interrupted 3' gene end
#11 opened Aug 26, 2020 by splicebox
2
Issue with long introns
#10 opened Jun 2, 2020 by sagnikbanerjee15
8
PsiCLASS running into an error
#8 opened Mar 13, 2020 by sagnikbanerjee15
10
PsiCLASS cannot annotate micro-exons
#6 opened Feb 7, 2020 by sagnikbanerjee15
3
Transcripts running in different directions having same gene name
#4 opened Jan 15, 2020 by sagnikbanerjee15
10
Assembling samples from multiple conditions
#3 opened Nov 7, 2019 by sagnikbanerjee15
14
Requesting help with some issues with PsiCLASS
#1 opened Nov 5, 2019 by sagnikbanerjee15
18
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