PR from development to master - VERSION 1.0.7 #830
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Without it tests/ will be installed as a top level Python module.
To fix this annoying note: "Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/setup-python@v4.."
…acts in color plots
The `imp` module has been removed in Python 3.12: https://docs.python.org/3/whatsnew/3.12.html#imp
The inplace=True keyword was removed from newer Pandas versions, thus the inplace option is replaced by re-assigning the variable, following Pandas recs (pandas-dev/pandas#57104) Changing df['popInd'].cat.set_categories(sim.net.pops.keys(), inplace=True) by df['popInd'] = df['popInd'].cat.set_categories(sim.net.pops.keys()) in analysis/spikes.py
fixed pointer id overflow on MPI (e.g. for gap junctions)
…overriden in individual conn rule
…List`-type connParams (but so far, only if `synsPerConn == 1` - need to elaborate more general approach)
Adding loading bar for cell and connectivity creation using tqdm package
Fixing double printing of Creating network sentence
define `cellInds` before reference in `syncLines` logic
ci: update setup-python action
fix(py312): remove `imp`
…pped dropped python 2 support
Pandas deprecated parameter fix + Loading Bar
add default padding (==1) for plotCSD, to avoid top/bottom edge artifacts in color plots
* fixed bug in conn, updated test/examples/* to use dynamic pathing * update CHANGES.md
…(beta version) (#819) * fixed bug in conn, updated test/examples/* to use dynamic pathing * update CHANGES.md * updated documentation with new batchtools (beta)
… loading bar. (#821) * Updated logic, bug fix cfg.progressBar = 2 will display all progress bars cfg.progressBar = 1 will call tqdm with progress bars w/ leave = 0 cfg.progressBar = 0 will disable the progress bar.
Removing the minimumdescent=False from the call to TextArea
Remove saveFileStep
Bug fix in scalebar - removing the use of the minimumdescent argument in the call to TextArea
Exlude tests from discovery / installation
…at has emerged with spack installation (EBRAINS platform). Will re-visit later.. This reverts commit e5aa9e8.
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