MueLu: Refactor LWGraphs #12629

cgcgcg · 2023-12-21T21:30:58Z

@trilinos/muelu

Motivation

This PR changes the graph classes MueLu uses for aggregation. The goal is to use the same data structures for the old non-Kokkos aggregation code path and the new Kokkos one.

Removed classes: MueLu::GraphBase, MueLu::Graph, MueLu::LocalLWGraph_kokkos
Added classes: MueLu::LWGraphBase
MueLu::LWGraph and MueLu::LWGraph_kokkos now are both just partial specializations of MueLu::LWGraphBase
Some changes to utility functions.
Use of the test ETI for the Viz test.
Add local graph stuff to Xpetra-Epetra.

Part of #11658.

trilinos-autotester · 2023-12-22T03:09:08Z

Status Flag 'Pre-Test Inspection' - Auto Inspected - Inspection is Not Necessary for this Pull Request.

trilinos-autotester · 2023-12-22T03:10:57Z

Status Flag 'Pull Request AutoTester' - Testing Jenkins Projects:

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Pull Request Author: cgcgcg

trilinos-autotester · 2023-12-22T04:32:59Z

Status Flag 'Pull Request AutoTester' - Jenkins Testing: 1 or more Jobs FAILED

Note: Testing will normally be attempted again in approx. 2 Hrs 30 Mins. If a change to the PR source branch occurs, the testing will be attempted again on next available autotester run.

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CDash Test Results for PR# 12629.

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packages/muelu/adapters/stratimikos/Thyra_MueLuTpetraQ2Q1PreconditionerFactory_def.hpp

trilinos-autotester · 2023-12-24T14:19:10Z

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trilinos-autotester · 2023-12-24T14:19:17Z

Status Flag 'Pull Request AutoTester' - GitHub reports Mergeable status = False

trilinos-autotester · 2023-12-24T19:49:47Z

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trilinos-autotester · 2023-12-24T19:51:29Z

Status Flag 'Pull Request AutoTester' - Testing Jenkins Projects:

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Pull Request Author: cgcgcg

trilinos-autotester · 2023-12-24T21:14:00Z

Status Flag 'Pull Request AutoTester' - Jenkins Testing: 1 or more Jobs FAILED

Note: Testing will normally be attempted again in approx. 2 Hrs 30 Mins. If a change to the PR source branch occurs, the testing will be attempted again on next available autotester run.

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CDash Test Results for PR# 12629.

Wiki: How to Reproduce PR Testing Builds and Errors.

trilinos-autotester · 2024-01-09T17:30:20Z

Status Flag 'Pull Request AutoTester' - User Requested Retest - Label AT: RETEST will be reset after testing.

trilinos-autotester · 2024-01-09T17:30:23Z

Status Flag 'Pre-Test Inspection' - Auto Inspected - Inspection is Not Necessary for this Pull Request.

trilinos-autotester · 2024-01-09T17:32:09Z

Status Flag 'Pull Request AutoTester' - Testing Jenkins Projects:

Pull Request Auto Testing STARTING (click to expand)

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Using Repos:

Repo: TRILINOS (cgcgcg/Trilinos)

Pull Request Author: cgcgcg

trilinos-autotester · 2024-01-09T19:02:31Z

Status Flag 'Pull Request AutoTester' - Jenkins Testing: all Jobs PASSED

Pull Request Auto Testing has PASSED (click to expand)

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CDash Test Results for PR# 12629.

trilinos-autotester · 2024-01-09T19:02:49Z

Status Flag 'Pre-Merge Inspection' - - This Pull Request Requires Inspection... The code must be inspected by a member of the Team before Testing/Merging
THE LAST COMMIT TO THIS PULL REQUEST HAS NOT BEEN REVIEWED YET!

trilinos-autotester · 2024-01-09T19:02:56Z

All Jobs Finished; status = PASSED, However Inspection must be performed before merge can occur...

trilinos-autotester · 2024-01-10T19:11:00Z

All Jobs Finished; status = PASSED, However Inspection must be performed before merge can occur...

trilinos-autotester · 2024-01-11T19:29:55Z

All Jobs Finished; status = PASSED, However Inspection must be performed before merge can occur...

trilinos-autotester · 2024-01-12T19:49:59Z

All Jobs Finished; status = PASSED, However Inspection must be performed before merge can occur...

csiefer2

@cgcgcg and I discussed that if this isn't a Tpetra::CrsGraph, then calling the class "Graph" might be confusion. Calling this "LWGraph" removes this confusion.

csiefer2 · 2024-01-22T16:55:51Z

packages/muelu/src/Graph/Containers/MueLu_LWGraphBase.hpp

+    maxLocalIndex_ = domainMap_->getMaxLocalIndex();
+
+    MaxNumRowEntriesFunctor<LO, typename local_graph_type::row_map_type> maxNumRowEntriesFunctor(graph_.row_map);
+    Kokkos::parallel_reduce("MueLu:LocalLWGraph:LWGraph:maxnonzeros", range_type(0, graph_.numRows()), maxNumRowEntriesFunctor, maxNumRowEntries_);


This seems to always happen on device. Is this intended?

This runs on host or device, depending on the value of the template argument OnHost:

Trilinos/packages/muelu/src/Graph/Containers/MueLu_LWGraphBase.hpp

Lines 116 to 119 in cb67a96

using device_type = typename std::conditional<OnHost,

Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>,

typename Node::device_type>::type;

using execution_space = typename device_type::execution_space;

Trilinos/packages/muelu/src/Graph/Containers/MueLu_LWGraphBase.hpp

Line 143 in cb67a96

using range_type = Kokkos::RangePolicy<local_ordinal_type, execution_space>;

cgcgcg · 2024-01-23T15:25:07Z

Let's retest to make sure the new H2D test runs.

trilinos-autotester · 2024-01-23T16:07:25Z

Status Flag 'Pull Request AutoTester' - User Requested Retest - Label AT: RETEST will be reset after testing.

trilinos-autotester · 2024-01-23T16:07:29Z

Status Flag 'Pre-Test Inspection' - Auto Inspected - Inspection is Not Necessary for this Pull Request.

trilinos-autotester · 2024-01-23T16:09:25Z

Status Flag 'Pull Request AutoTester' - Testing Jenkins Projects:

Pull Request Auto Testing STARTING (click to expand)

Build Information

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Using Repos:

Repo: TRILINOS (cgcgcg/Trilinos)

Pull Request Author: cgcgcg

trilinos-autotester · 2024-01-23T17:48:30Z

Status Flag 'Pull Request AutoTester' - Jenkins Testing: all Jobs PASSED

Pull Request Auto Testing has PASSED (click to expand)

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CDash Test Results for PR# 12629.

trilinos-autotester · 2024-01-23T17:48:51Z

Status Flag 'Pre-Merge Inspection' - - This Pull Request Requires Inspection... The code must be inspected by a member of the Team before Testing/Merging
THE LAST COMMIT TO THIS PULL REQUEST HAS BEEN REVIEWED, BUT NOT ACCEPTED OR REQUIRES CHANGES!

trilinos-autotester · 2024-01-23T17:48:57Z

All Jobs Finished; status = PASSED, However Inspection must be performed before merge can occur...

trilinos-autotester · 2024-01-23T18:09:20Z

Status Flag 'Pre-Merge Inspection' - SUCCESS: The last commit to this Pull Request has been INSPECTED AND APPROVED by [ csiefer2 ]!

trilinos-autotester · 2024-01-23T18:09:27Z

Status Flag 'Pull Request AutoTester' - AutoMerge IS ENABLED, but the Label AT: AUTOMERGE is not set. Either set Label AT: AUTOMERGE or manually merge the PR...

cgcgcg added pkg: MueLu MueLuReview To request that the MueLu Team nitpick this PR labels Dec 21, 2023

cgcgcg self-assigned this Dec 21, 2023

cgcgcg requested review from a team as code owners December 21, 2023 21:30

cgcgcg mentioned this pull request Dec 21, 2023

MueLu: Merge *_kokkos factories and their classical counterparts #11658

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36 tasks

csiefer2 reviewed Dec 22, 2023

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packages/muelu/adapters/stratimikos/Thyra_MueLuTpetraQ2Q1PreconditionerFactory_def.hpp Show resolved Hide resolved

cgcgcg force-pushed the refactorLWGraph branch from 9a9e4ba to 1a84731 Compare December 24, 2023 06:44

cgcgcg force-pushed the refactorLWGraph branch from 1a84731 to 24935e5 Compare December 24, 2023 19:45

cgcgcg force-pushed the refactorLWGraph branch from 24935e5 to f1e5e58 Compare January 9, 2024 17:13

cgcgcg added the AT: RETEST Causes the PR autotester to run a new round of PR tests on the next iteration label Jan 9, 2024

trilinos-autotester removed the AT: RETEST Causes the PR autotester to run a new round of PR tests on the next iteration label Jan 9, 2024

cgcgcg mentioned this pull request Jan 11, 2024

MueLu: Refactor aggregation #12657

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cgcgcg added the AT: WIP Causes the PR autotester to not test the PR. (Remove to allow testing to occur.) label Jan 16, 2024

cgcgcg force-pushed the refactorLWGraph branch 3 times, most recently from b7f838b to b35e341 Compare January 16, 2024 14:37

cgcgcg added 5 commits January 17, 2024 08:36

Xpetra: Add getLocalGraph* to EpetraCrsGraph

d7527ec

MueLu Utilities: Refactor DetectDirichletRows and ApplyRowSumCriterion

d2ccd51

MueLu: Refactor LWGraphs

894c622

MueLu Viz test: Use test ETI

18286af

MueLu RefMaxwell: Fix spelling

cb67a96

cgcgcg force-pushed the refactorLWGraph branch from b35e341 to cb67a96 Compare January 17, 2024 15:37

cgcgcg requested a review from GrahamBenHarper January 19, 2024 14:18

csiefer2 reviewed Jan 22, 2024

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trilinos-autotester removed the AT: RETEST Causes the PR autotester to run a new round of PR tests on the next iteration label Jan 23, 2024

csiefer2 approved these changes Jan 23, 2024

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cgcgcg merged commit cfe9805 into trilinos:develop Jan 23, 2024
6 checks passed

ndellingwood mentioned this pull request Jan 24, 2024

MueLu: Hip compilation errors with LWGraph_kokkos test, rocm/5.6.0 #12691

Closed

	using device_type = typename std::conditional<OnHost,
	Kokkos::Device<Kokkos::Serial, Kokkos::HostSpace>,
	typename Node::device_type>::type;
	using execution_space = typename device_type::execution_space;

MueLu: Refactor LWGraphs #12629

MueLu: Refactor LWGraphs #12629

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cgcgcg commented Dec 21, 2023

Motivation

trilinos-autotester commented Dec 22, 2023

trilinos-autotester commented Dec 22, 2023

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Test Name: Trilinos_PR_gcc-8.3.0

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trilinos-autotester commented Dec 22, 2023

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trilinos-autotester commented Dec 24, 2023

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trilinos-autotester commented Dec 24, 2023

trilinos-autotester commented Dec 24, 2023

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trilinos-autotester commented Dec 24, 2023