Regulatory Sequence Analysis Tools (RSAT)

This folder contains the code required to run a local version of the software suite Regulatory Sequence Analysis Tools (RSAT).

Contact: Jacques.van-Helden[AT]univ-amu.fr , rsat-contact[AT]list01.bio.ens.psl.eu

Authors: Jacques van Helden + the RSAT team.

Files and folders

contrib software tools developed by collaborators, in C, requiring compilation.
doc documentation in various formats.
perl-scripts Perl scripts, which constitute most of the RSAT and NeAT code.
public_html Web interface (cgi + php scripts).
python-scripts Python scripts
ws_clients examples of Web services clients in different languages.

app_sources download the code source of diverse applications (dependencies plus optional complementary software tools).
bin executable binaries (including the compiled C programs).
downloads this folder is created at RSAT initialisation. It serves to download the genome data from NCBI, Ensembl or other databases, which will serve to install organisms on RSAT.

Name		Name	Last commit message	Last commit date
Latest commit History 56,998 Commits
.github/workflows		.github/workflows
R-scripts		R-scripts
bin		bin
contrib		contrib
doc		doc
docker		docker
fonts		fonts
info		info
installer		installer
makefiles		makefiles
old		old
perl-scripts		perl-scripts
public_html		public_html
python-scripts		python-scripts
share/rsat		share/rsat
src		src
ws_clients		ws_clients
.gitignore		.gitignore
.project		.project
.travis.yml		.travis.yml
CITATION.cff		CITATION.cff
CODE_OF_CONDUCT.md		CODE_OF_CONDUCT.md
LICENSE.txt		LICENSE.txt
README.md		README.md
RSAT_config_default.bashrc		RSAT_config_default.bashrc
RSAT_config_default.conf		RSAT_config_default.conf
RSAT_config_default.mk		RSAT_config_default.mk
RSAT_config_default.props		RSAT_config_default.props
RSAT_config_default_apache2.2.conf		RSAT_config_default_apache2.2.conf
test_rsat.t		test_rsat.t
version.txt		version.txt